Poecilia mexicana (shortfin molly): 106932309 Help Entry 106932309         CDS       T08022                                  Symbol lig3 Name (RefSeq) DNA ligase 3 isoform X1   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei03410   Base excision repair Brite KEGG Orthology (KO) [BR:pmei00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     106932309 (lig3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pmei03400]     106932309 (lig3) Enzymes [BR:pmei01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      106932309 (lig3) DNA repair and recombination proteins [BR:pmei03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      106932309 (lig3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C RNA_ligase BRCT_2 mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  106932309 NCBI-ProteinID:  XP_014866436 Ensembl:  ENSPMEG00000002289 LinkDB All DBs Position Unknown AA seq 1010 aa AA seqDB search MRRLRLPHSHNYMQRHLIFLVQKTVCVGRQPFGTLIRCKQPSTFCRTFLISSTSDQRKSL ASHKHHLQKRHAPWTLICRCFSEWPDMSEQRFLVEYAKRGTAGCKKCKDKIQKGIVRIGK IVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDLTELEGWEELQDEDKELINKHV SDLMAKVNASPKKKVQAKLNTTGQLMAPPADPSVNAPRKFSGFTAAKAGSSGSSSSPGLS ASPAAKAGSSSALSTQLCDAQHKDCLFREFRKLCAMVAENNSYNSKTQIIEKFLKKGTGG DKFHGDLYLTVKLLLPGVVKSVYNLNDKQIVKLFSRIFRSNQEDMVRDLEQGDVSETVRI FFEESKSFPPAAKSLLTIQEVDASLMRLAQLTKEDEQQSELENIAKKCTSNDLKCIIRLI KHDLKMNAGAKHVLDAVDPNAYDAFKASRNLGDVIERVLRNQQDASSGSGPRKLLTIEAS LMTPVQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGNTFSYFSRSLKPVLPH KVAHFKEYIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDANVCLFVFD CIYFNGVSLMERPLCERRKFLDDNMVEVPNRILFSEMKHVTRAGDLAEMITRVIREGLEG LVLKDVKGSYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCY DPDSKKWCTVTKCSGGYDDAMLARLQKELDVIKISKEPGKIPSWLKIVKNYYPDFIIRDP EQAPVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKTATNLHQLRELFRISKENC DFKVTAGPSTSDDKGSSGGDSGGNSPSSSSSRSTPAKKTSNSTPTKPKAVKSKPRTPTSQ ASSVKKVKKSEESVQSNGQNKTSSQLLQPRNDKTLLDIFSGVKLFLPDSVQDFDRLRRYF VAYDGDLVPDYDSASATHTLGDPEGGSRAQRVSPSWIWECIRKRRVVPPC NT seq 3033 nt NT seq  +upstreamnt  +downstreamnt atgaggaggctccgacttccccacagtcacaactacatgcagagacatctaattttcttg gttcagaagactgtctgtgtgggccgacaaccttttggtacactaatccgatgtaaacaa ccttcaacgttttgcagaacatttctaatttcatctacctctgatcagcgaaaatcctta gcttcccataaacaccatcttcaaaaaagacacgctccctggactttgatttgccggtgc ttttctgagtggccagatatgtcggaacaacgcttccttgtggaatacgccaaacgtggg acggcagggtgcaagaaatgcaaggacaaaatccagaagggcatcgtgcgcatagggaaa atcgtgccaaaccctttcagcgagtctgctggcgaaatgaaggagtggtatcacgtgaag tgcatatttgagaagctggagagggccagagccacgacgaagaagatcgaggacctgacg gagctggagggctgggaggagctgcaggacgaggacaaagagctcattaataaacacgtt tcagacctgatggccaaagtcaatgcaagtcctaaaaagaaggtccaggccaagttgaac accactggtcagctcatggcgccccctgctgacccttctgtcaatgctccgaggaagttt tctggcttcacagctgcaaaggctggcagctccggtagctccagcagccccggactgtcg gcgtccccggcggccaaagccggctccagcagcgccctgtccactcagctctgtgatgcc cagcacaaagactgcctcttcagggagtttcgcaaactctgcgcaatggtggctgagaac aacagctacaacagcaagacacagattatagagaagttcctgaagaagggcacaggagga gataaattccacggagatctttacctgacggtgaaactgctgctgccaggcgtggtgaaa agtgtttacaacctgaatgataagcagatagtaaaactcttcagccgcatattcagatcc aaccaggaggacatggtgcgagatctggagcagggcgacgtgtcagaaactgtgaggatt ttcttcgaggagagcaaatcttttcctcctgctgccaagagcctcctaacaatccaggaa gtagatgcgtccctgatgcgcctcgctcagctcacgaaggaggacgagcagcagagcgag ctggagaacatcgccaaaaaatgcaccagcaacgacctgaaatgcatcatcaggctaatt aagcacgacttgaagatgaacgccggcgccaaacacgtgttggacgcggtagatccaaac gcgtatgatgccttcaaggcctcccgtaaccttggcgacgtgatcgagagggttctgagg aaccagcaggacgcctccagcggctctggacccaggaagctcctgaccatagaggcgtcg ctcatgactcccgtccagccgatgctggccgaggcatgtaaatccatcgagtacgccatg aagaaatgtcccaacgggatgtactccgagataaaatacgacggcgagcgcgttcaggtc cacaagaatggaaacaccttcagctacttcagccgcagcctcaagccggtgctgccccac aaggtggcccacttcaaagagtacatcccccaggctttccctggtggtcacagcatgatt ctggacgctgaagtcctgctgattgacacaaagaccagcaaaccgctgccgtttggcact ctgggtgttcacaagaaagctgcctttcaagacgccaacgtgtgtctgtttgtgtttgac tgcatttacttcaacggtgtgagtttgatggaaaggccactctgcgaacgcaggaagttc ctggacgacaacatggtggaagtcccaaacaggatcctcttctcagagatgaagcacgtc acgagggcaggagacctggcggagatgataactcgcgtcatcagagaaggactggaaggc ctggtgctgaaagacgtaaagggaagctatgagccggggaagcgacactggctgaaggtg aagaaggattatttgaacgagggagccatggccgacacagcagacctggtggtgctcggt gctttctatggaaaaggatcaaacgggggcatcatgtctagctttctgatgggctgctat gacccggactcgaagaagtggtgcacggtgaccaagtgctccggaggctacgatgacgcc atgctggcccgactccagaaggagctggacgtgatcaaaatcagcaaggaacccgggaaa atccccagctggttgaaaattgtcaagaactattatcctgatttcattattcgtgaccct gagcaagctccggtctgggagatcactggcgccgagttctccaaatcagaaatgcacacc gctgatggcatctccatccgcttcccccgcatgacgcgaatccgcgacgataaggactgg aagacggccaccaacctgcaccagctcagggagctgtttcgcatttccaaggagaactgc gactttaaagtgacggcgggtccttccacgtccgatgacaaaggctcatcgggaggagac agcgggggaaactcgccgtcgtcctcatccagcaggagcactccggccaaaaagacgagt aacagcacccctaccaaaccaaaggctgtaaaatcaaaacctcgcactcccacctctcag gcctccagtgtcaagaaggtgaagaagagcgaggagagcgttcagagcaacggacaaaac aaaacgtcttcccagctgctgcagccgaggaacgacaagacgctgctggacatcttcagc ggggtcaagctcttcctccccgactccgttcaggacttcgacaggctgcggcggtacttt gtggcgtacgacggagacctggtgccggattacgactccgcctcggctacacacacgctg ggcgacccggaggggggcagccgggcccagagggtttctcccagctggatctgggaatgc atccgaaagcggcgcgtcgttcctccctgctga

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