Poecilia mexicana (shortfin molly): 106932430 Help Entry 106932430         CDS       T08022                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei03440   Homologous recombination pmei03450   Non-homologous end-joining pmei04218   Cellular senescence Brite KEGG Orthology (KO) [BR:pmei00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     106932430 (rad50)    03450 Non-homologous end-joining     106932430 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     106932430 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pmei03032]     106932430 (rad50)    03400 DNA repair and recombination proteins [BR:pmei03400]     106932430 (rad50) DNA replication proteins [BR:pmei03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     106932430 (rad50) DNA repair and recombination proteins [BR:pmei03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      106932430 (rad50)     BRCA1-C complex      106932430 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      106932430 (rad50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 AAA_15 SbcC_Walker_B SMC_N ABC_tran zf-met AAA_29 AAA_13 AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  106932430 NCBI-ProteinID:  XP_014866628 Ensembl:  ENSPMEG00000018802 UniProt:  A0A3B3YVK9 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGIEDKDKQIISFFTPLTVLVGPNGAGKTTIIECLKYATSGELPPG SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRSMSCTQKAKNYSFKSLEQVITR IKDGERVSLSSKCGELDREMISALGVSKPVLNHVIFCHQEDSNWPLSEGKALKDKFDSIF AATKYIKALETMRQLRLKQSQTVKECQVELRYLKQNKEKAQQIRETVATKEAQLMASKDS VHQTESQIEPLENQLMEFDQKLGKVMKLDNDIKALDSRKKQMEEDNKELEETMEQVFQGS DEELQDIYQNHQRTVKEKERRLTDCQRELERAGRECQRLNRVKADLLVEQGRLQLEADRH TQNVKSRDTLVRSLSSHLEMEGYDRPPFTSLQLESFHRHVTQRLEQEKETLSQITADLQE KEQQKQQSIDEIRDKKTGLERTVELKRDMQGKKQQELRNIRADLQKLEGSSSRLQELENE LAKAECELERAVQSSNVEELKTEIEGLQREKTELDRAQRRLDQEMQILNTHTTARTQMDM LKKDKTEKEEQVRKTKARHGENLTSLLGHFPNKRELEDWIYSKSKEINSTRDKLAKLNKD LASSEQNKSHIATELRKKEQQLTSDEEKFFSVCGSQDLEQDLGRLQEDLEKVSKQRAMLA GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEQDLK KKERKRDEMMALKPVRQAIVQFQEKELPELRNRLQIVNREIERLKAEIEEQDTLLGTLMS EEETAKACLQDISLMDRYLMDLKELDRKIAQQAAKLQGVDLTRTIQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQDQIQILKSAVNETRAEKLQLSSDMQKQQQLEEQCVDFTAEIQA LTRDIREAKEQLSPLSAALEKLQQEKQELMEHKRKKQEEGQEKINGIKERVKSVSILERD IKKYMDDGREEYKEQKESELQETNTQLHEAEKQKDKINKEMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVVAKRETLMKDMGNMQVLQLRQERRDAERKLEDLKKNRSIALGRQKG FEEEILHYRKELREDQYDKAEERYKNKMITMRTTELVIKDLDLYYKALDQTIMRFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVKRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYIENFYRIRKNQDQNSEINKCSISSLSSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagatagacaaaatgagcatcctcggagtgaggagctttgggattgaggataaa gacaaacaaatcatttccttttttactcctttgactgttctggtgggacccaatggagca ggaaaaacgactattattgaatgcctcaagtatgcaacatcgggggaacttccccctgga tctaaaggaggagcttttgttcatgatccaaaggatgcccatgagacggatgtacgagct cagattcgactcctgttctcagacgttaatggagagaaagtcaccatccagcgctccatg tcctgcacacagaaagcaaagaactattcattcaaaagcttagagcaggtcattactaga ataaaagatggtgaaagagtaagtctttcttctaagtgtggtgagctggatcgggagatg atttctgctttaggagtatccaagccggtgctgaatcatgtcatcttttgtcaccaagaa gattccaactggccacttagtgagggcaaagcactcaaagacaaatttgactccattttt gctgcaaccaaatatattaaggctctggagacaatgcgtcagctgcgcctcaaacagagt cagacagtcaaagaatgccaagtggagttacgctacctgaagcaaaacaaggagaaggct cagcagatcagagagactgtggccaccaaggaggctcagctgatggcctccaaagacagt gtccaccagacggagagccagattgagccgcttgagaatcaactgatggagttcgaccag aaactggggaaggtgatgaagttggacaatgacattaaggctttggacagcaggaagaaa cagatggaggaagacaacaaagagctggaggaaaccatggaacaggtgtttcagggttca gatgaggagctacaagacatttaccagaaccaccagaggacagtgaaggagaaggagcgc aggttgacagactgccagagagagctggagagagccggccgggaatgtcagagactcaac agagtgaaggccgatctcttggtcgagcaaggtcgtcttcagctggaagctgatcgccat actcagaacgtcaagagccgtgacactctggttcgctctttgtcatcccatctggagatg gagggttatgaccgcccccccttcacctcgctgcagcttgaaagctttcatcgtcacgtc acacaaagactggagcaggagaaagagacactcagtcagattacagcggatctgcaggaa aaagagcaacagaagcagcagtctatcgatgaaataagggataagaagactggcctggag agaactgtagagctgaagagggacatgcagggaaagaagcagcaggagctgaggaacatc agggcggatctgcagaaactcgaagggtcatccagtcgactgcaagagctggaaaatgaa ttggccaaagctgagtgtgagctggaacgtgccgttcagagctccaatgtcgaagagctg aagactgagattgagggactccagagagaaaagacggagcttgaccgggcgcagagacgg ctcgatcaagagatgcagattcttaacacgcacacaactgcacgcacgcagatggacatg ttgaagaaagataagacagagaaggaagagcaggtacggaaaaccaaggctcgtcacggc gagaatctcacgtccctcctgggtcattttcccaacaagagagaactggaagactggatc tattccaagtccaaggaaatcaatagtacaagggacaaacttgccaaattaaataaagac ttggcgtcaagtgagcagaacaaaagccatattgctactgagttgcggaagaaggagcaa caactaacaagcgatgaagagaagttcttcagtgtatgtggcagtcaggatctggagcag gatctgggcagactgcaggaagatctggagaaggtatccaagcaaagagccatgttagca ggagccacagccgtgtacactcagttcatcagccagctgacagaggagagggagccctgc tgccctgtgtgccagcgcacctttccttcagaatcggacctgcaggaagttatcagcgac atgcagtccaagctacgcctggtgcctgacaaactgaagaacacagagcaggacctgaag aagaaggagaggaagagggatgaaatgatggcactcaaacctgtgagacaggccattgta cagtttcaggagaaggagctgcctgagctgagaaaccgacttcagattgtgaacagagaa atcgagaggctcaaggctgaaatagaagaacaggacacgctgcttggtaccttaatgtct gaggaggaaacagccaaggcctgcctgcaagacatctctctgatggacagatacttgatg gaccttaaagagctggacagaaaaatagctcagcaagcagctaaactccagggagtagac ctgactagaaccattcagcaagttagtcaggagaaacaagaaacgcagcacaagctggac accacctctagcaaaatggagctgaaacgtaagctgatccaagatcaacaggaccagatt cagatcctgaaaagtgccgtaaatgaaacgagagcagagaagctgcagctaagcagtgac atgcagaaacagcagcagctggaggagcaatgtgttgactttactgcagagattcaggct ttaaccagagacattagggaagcaaaggaacagctgtcacctctgtctgctgctttggaa aaactgcaacaagagaagcaagagttaatggagcataaaagaaagaaacaggaagaaggc caagaaaagatcaatggcataaaagagagggtgaagtctgtctccattttggaacgagat attaaaaaatacatggatgacggaagagaggaatataaagagcaaaaggaatcagagctt caagaaaccaacactcagctccatgaggctgagaagcagaaagacaaaataaataaggag atgggaaacatccgtcaggacatagatacccaaaaggtccaagagcgctggttacaagac aatctgacattaaggaaacgagttgaggaactgaaggaggttgtagctaaacgagaaact cttatgaaagacatgggcaacatgcaggtgttgcagctgcgccaagaacgtcgtgatgca gaacgcaagttagaagatttgaagaagaaccggagcatcgcactaggtcggcagaaaggc ttcgaagaagagattctgcattacagaaaagagttgagagaagatcagtatgacaaagct gaggagcgctacaaaaacaagatgatcaccatgaggaccactgagttggtcattaaagac cttgatctctactacaaagcccttgatcaaaccatcatgaggttccacagtatgaagatg gatgagatcaataaaattatcagagacctgtggcgcagcacctacaggggtcaagatatt gagtatgtggagatcaggtcggatgtggatgagaattcatcagctggagtcaagaggagg gtttacaactacagagtagttatggtgaaaggagacacagctctggatatgagaggacgc tgcagtgctggccagaaggtgttggcatccctgatcatccgtcttgccctggcagagact ttctgtctgaactgtgggatcttggccttggatgagcccaccaccaacctggacagagag aacatcgagtccttggcacatgcccttgtagaaatcatcaagagtcgttctcgtcagcgc aatttccagcttctcatcatcacccatgatgaagactttgtggagctcctgggccgctcc agctacatcgagaacttctaccgaatccgcaagaaccaggaccagaactctgaaatcaac aaatgcagcatctcctctctctcgtcttaccttcattaa

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