Poecilia mexicana (shortfin molly): 106932474
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Entry
106932474 CDS
T08022
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106932474 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106932474 (sf3b1)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106932474 (sf3b1)
Spliceosome [BR:
pmei03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106932474 (sf3b1)
Complex B
106932474 (sf3b1)
Complex C
U2 SnRNP specific factors
106932474 (sf3b1)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
106932474 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
106932474
NCBI-ProteinID:
XP_014866684
Ensembl:
ENSPMEG00000000446
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKASLQEENGEQGVGLVSTGFYDQEIYGGSDSRFAGYVTS
IAANEQEDDDEDDTSTSLLGQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKIADREDE
YKARRRQMIISPERLDPFADGGKTPDPKLQVRSYVDVMMEQNLSKEEREIRLQLAEKAKS
GDLKAVNGSAASQAAAKRKRRWDQTADQTPSNATPKKLSSWDQADAGAETPGHTPAHTPS
NSRWDETPGRPKGSETPGATPSTRMWDPTPSHTPAGAATPGRDTPGHATPGHGGATGSVR
KNRWDETPKTERETPGHGSGWAETPRTDRGEESVGETPTPGASKRKSRWDETPASQMGSS
TPLLTPGKTPLGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFP
EGYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFHMQAEDRTTKQMNDQPSGNLPFLKP
DDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYA
RVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLK
AVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAI
AALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREV
MLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRN
YRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLE
EQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQ
QAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH
KKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAS
AVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVALGPCRMLQY
CLQGLFHPARKVRDVYWKIYNSIYIGSQDALISHYPQVYNDEKNVYVRYELEYVL
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgaagatatcgaggcccagatcctggagatccagggg
atgaaggccagcctgcaggaggagaatggcgagcagggcgtgggtctggtctccactggc
ttctacgaccaggagatctatggcggcagcgacagccgcttcgctggatatgtcacttca
atcgcagccaatgagcaggaggacgacgatgaagacgacacgtccactagcctactgggg
cagaagaaacctggctaccacgcaccggtggcaattctcaactccatccctcagtcggat
gagcagtacgacccgttcgcagaacatcgtccgcagaagatcgccgaccgggaggacgag
tacaaagcccgccgcagacagatgatcatctcgcctgagcgtctcgacccttttgctgat
gggggcaaaacaccggaccccaagctgcaggtcaggtcgtatgtggacgtgatgatggaa
cagaacctctccaaagaggagagggagattcgtctgcagctggcagagaaggccaagtcg
ggggatctgaaagctgtcaatgggtctgctgcctcccaagctgctgccaaacgaaagcgc
cgttgggaccagacagctgaccaaactccgtccaacgccacacccaaaaaactgtccagc
tgggaccaggcagacgccggggctgagactccaggacacactcctgcacacacgccttcc
aacagccgctgggacgaaactcccggccgcccgaagggcagtgagactccaggggccaca
cccagcacccgtatgtgggaccccacccccagccacaccccagccggcgccgccacacct
ggccgggatacgccaggccacgctacgcccggccacggcggcgccacggggagcgtccgc
aagaaccgctgggacgaaaccccaaagacggagcgcgagacgccgggacacggcagcggc
tgggccgagacaccgcgcacggacagaggggaggagtcggtgggggagaccccgaccccg
ggagccagcaagaggaagtctcggtgggatgaaacgcccgccagccagatgggctcctcc
acaccgctgctgacgcctggaaaaactccactaggaacgccggctatgaacatggccaca
ccgacacccggacacctgatgagcatgaccccggagcagctccaggcctggaggtgggaa
cgggagattgatgagaggaacagacctctgaccgacgaagagctggacgccatgttcccg
gaaggatacaaggtgttgcctcctccagcggggtacgtaccgatccgcaccccggcccgt
aagctgtcggccactcccaccccaatcggaggcatgacgggcttccacatgcaggcagag
gaccggaccaccaagcagatgaacgaccaaccctcaggaaacctccccttcctcaaacct
gatgacattcagtactttgacaagctgctggtggaggtggatgaatcaactctgagcccc
gaggaacagaaggaaaggaagatcatgaagctgctgctgaagatcaagaatggaactcca
cccatgagaaaggccgctctgcgccagataaccgacaaagctcgagagttcggagcaggt
ccgctcttcaaccagatcctgccgctgctcatgtcccccaccctggaggaccaagagcgc
catctgctggtcaaagtcattgaccgcatcctctacaaactggacgacctggtccggcca
tacgtgcacaagatcctggtggtgattgagccactgctgatcgatgaggactactacgcc
agagttgaaggcagagaaatcatctccaacttggcaaaggctgccgggttggccaccatg
atctctacgatgcgacccgacatcgacaacatggacgagtacgtcagaaacacgaccgct
cgagccttcgccgtggtggcctccgccctcggcattccctcgctcctccccttcctcaaa
gccgtgtgcaaaagcaagaagtcatggcaggccagacacacgggcatcaagatcgtgcag
cagatcgccatcctgatgggctgcgccatcctgcctcacctgcgcagcttggtggagatc
attgaacacggtctggtggacgagcagcagaaggtgaggaccatcagcgctctggccata
gctgccctggccgaggccgccactccctacggcatcgagtcgtttgactctgtgctgaag
ccgctgtggaagggcatccggcagcacagaggaaagggtctggctgcgttcctcaaagct
atcggctacctgatccccctgatggacgccgaatacgcaaactactacaccagggaggtg
atgctgattctcatcagagagttccagtcgcctgatgaggagatgaagaagattgtgctg
aaggtggtgaagcagtgttgtggcaccgatggtgtggaagcaaactacatcaaaactgag
atcctgcccccgttcttcaagcacttctggcagcacaggatggctctggacagacgcaac
tacagacagctggtggacaccactgtggagctggctaacaaagtgggagcagccgagatc
atttcccgcattgttgacgacctgaaagacgaggcggagcagtacaggaagatggtgatg
gagaccatcgagaagatcatggggaacctgggagccgccgacatcgaccacaagctggag
gagcagctgatcgacggcatcctgtacgccttccaggagcagactacagaggattctgta
atgctgaatgggtttggtacagtggtcaacgccctggggaagcgcgtgaagccgtacctg
cctcagatctgcggtacggtcctgtggcgtctcaacaacaagtcggccaaagtccgccag
caggcggccgacctcatttcccgcacggcggtggtgatgaaaacctgtcaggaggagaag
ctgatgggtcacttgggcgtggttctgtacgagtacctgggagaggagtaccccgaggtc
ctgggcagcatcctgggagcgctgaaggccatcgttaatgtcataggtatgcacaagatg
actccaccaatcaaagacctgcttcctcgtttgacgcccatcctgaagaaccggcatgag
aaggttcaggagaactgcatcgacctggtgggccggatcgctgataggggtgccgagtac
gtgtcagccagagagtggatgaggatttgctttgagttgctggagttgctcaaagctcac
aaaaaggcaatccgcagagctaccgtcaacacgtttggttatattgccaaagccatcggg
cctcatgacgtcttggccactctgctgaacaacctgaaggtccaggagcgtcagaaccgc
gtgtgtacaaccgtggccatcgccatcgtggcggagacctgttcgccgttcacggtgctg
ccggcgctcatgaacgaatacagagtgcccgagctgaacgtgcagaacggcgtcctgaag
tcgctctcgttcctgttcgagtacatcggagaaatgggaaaagactacatctacgctgtc
acacctctgctggaggatgcattaatggacagagatttggtccacaggcagaccgccagc
gccgtcgtccagcacatgtctctgggtgtctacggttttggctgtgaagactctctcaac
catttactgaattatgtgtggcccaacgtttttgagacgtctccccacgtcatccaggct
gttatgggcgccctggaggggctgagagtggccctcggcccctgccgcatgctgcagtac
tgcttacagggtctgttccatccggcccgaaaggtgagagacgtctactggaagatttac
aactccatctacattggttcccaggacgccctgatttctcattacccacaggtctacaac
gatgagaagaacgtctacgtccgctatgagctcgaatacgttttgtaa
DBGET
integrated database retrieval system
