Poecilia mexicana (shortfin molly): 106932842
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Entry
106932842 CDS
T08022
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04080
Neuroactive ligand-receptor interaction
pmei04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106932842
04082 Neuroactive ligand signaling
106932842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106932842
Ion channels [BR:
pmei04040
]
Ligand-gated channels
GABA-A
106932842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
DUF5874
Motif
Other DBs
NCBI-GeneID:
106932842
NCBI-ProteinID:
XP_014867248
Ensembl:
ENSPMEG00000006534
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRTGIRASLLPGVIDGEQLLVSVNSIPERRALNNMTWLVLSLLLLLGCQDSLCQQSSEAQ
KEEDANEDSTVFTRILDGLLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTID
VFFRQSWKDERLCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKD
DGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAE
DGSRLNQYHLIGQTADTEDIRTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQV
SFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIE
FATVNYFTKRSWAWDGKKALEAQHPKKRDPMVLSKKANNVCSAGVNYTPNLTKDVSISTI
SNTTSVQLRGSESKLVDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPMVKG
VVAST
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgggatcagggcttccctcttacctggtgtcatagatggcgaacaacttctt
gtttccgtcaacagcattcctgaaagaagagctctcaacaacatgacttggcttgtactt
tccctcctgctcctgctcggatgccaagatagtctttgccagcagtcgtcggaagctcag
aaagaggaggacgccaacgaggacagcacggttttcaccaggatcctggacggcctcctg
gacggctacgacaacaggctccgcccgggactcggagagaatgtgacggaaatcaagacg
aacatctttgtcaccagcttcggtcccgtgtccgacacagagatggaatacaccatagac
gtgttctttcgtcaaagctggaaggacgagcgtctctgcttcaaaggccccatggagatg
ctcccattaaacaacctgctggccagcaacatttggactcctgataccttcttcctcaac
ggcaagaagtccatcgctcacaacatgaccacacccaacaagctgctgagactgaaggac
gacggaaccctgctctacacaatgaggttgaccatctcagcagaatgccccatgcaactg
gaggactttcccatggacgcccacgcctgcccgctcaagtttggcagctatgcctatcca
gtatcagaggtggtctacacatggactcaaggagctgctaagtctgttgtggtggcagaa
gacggttccaggctcaaccagtaccatctaattggacaaacagctgacacagaggacata
cgcaccagcagaggacaatacactgtgatgatggcacacttctatctgaagaggaagatc
ggatattttgtcatccagacgtacatgccatgttttatgaccgtaatcctgtcccaggtg
tcgttttggctcaacagagagtctgttcccgcgcggaccgtgtttggggtgactacggtg
ctgactatgaccacactcagcatcagcgccagaaactcgcttccgaaagtagcctacgca
acagccatggactggttcatagctgtctgctacgctttcgtcttttcagctcttatcgag
tttgccacagtgaactacttcaccaaaaggagctgggcctgggatggcaagaaagctctg
gaagcacagcaccctaagaaacgagacccaatggtgctctcaaaaaaggccaacaatgtt
tgctcagcaggcgtcaactacacccccaatctcaccaaggatgtgtccatctccaccatc
tccaatacgacgtcggtgcagctgcggggctcagagagcaaactggtggaccccaaaaag
acgtacaacagcgtcagcaagatcgacaagatgtcgcgaatagtgttccccgtcctcttc
ggaaccttcaacctcgtctactgggccacatacctgaacagagaaccgatggtgaaagga
gtcgtcgcttccacataa
DBGET
integrated database retrieval system
