Poecilia mexicana (shortfin molly): 106933047
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Entry
106933047 CDS
T08022
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106933047 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106933047 (smarca2)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106933047 (smarca2)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106933047 (smarca2)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106933047 (smarca2)
Chromatin remodeling factors
BAF complex
106933047 (smarca2)
PBAF complex
106933047 (smarca2)
GBAF(ncBAF) complex
106933047 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
106933047
NCBI-ProteinID:
XP_014867561
Ensembl:
ENSPMEG00000001815
UniProt:
A0A3B3WDF4
LinkDB
All DBs
Position
Unknown
AA seq
1602 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QAQGQSDYSQDNMYPMHKPMEAAMNDKTMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQH
SQGYMSPHPSPMGIHEHASSPMSGGGGGPTPPHMPPSQPGPMMSMDPQGGMATMSGMGQP
GRGPSSFSPVQLQQLRAQILAYKILARGQPLPENLQLAVQGKRSLPTMQQQQQAPLPPQQ
QPQQPQQQQQPPPPQQQASGASPYRPSGMSMAPMSGPQSSPCPTPALQGHNQSTGPKPWT
DGQASDNQAQKHLTPVPSGRPSPAPPQAPVGAPGPVPGSSGAVHPPGQQVSPMLQMQQKQ
NRITPVQKPQGLDPVGILQEREFRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRL
LNFQRQLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRR
QKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTRAVATWHTNTEREQKKETERLEKERMKK
LLEEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKTKKKK
VEGDGEGTSAIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPG
YEVAPRSDSEESGSEFEEEDEEEMGKAETEEKKKTDPNGDEEAKNDAKNIIESAKQDVDD
EYSVPTGETSSQSYYGVAHAVIEKVEKQSSLLINGMLKQYQVQGLEWMVSLYNNDLNGIL
ADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGT
PGLRRGLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVL
NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLN
EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQRVLYRHMQKGILL
TDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIINGHDLYRA
SGKFELLDRILPKLHATGHRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKSEDRAAL
LKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNE
VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNE
DEDEVPDDETLNQMIARNEDEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDD
AEVERLTYEEEEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKR
KRRQDKDSSSRDDGGMKAKKRRGRPPAEKLSPNPPKVTKQMNTIIDTVINYRDGSGRQLS
EVFVQLPSRKELPEYYELIRKPVDFKKIKERVRNHKYRSLSDLEKDVMLLCQNAQTFNLE
GSQIYEDSIVLQSVFKSARQKIAKDEDSEDDSDEDDDDDYDSEAEAKSVRVKIKLGRDGR
SHDKGKKRQSRGKAKPVVSDDDSDDDLDDNDQSDKSKSDDDD
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccgtcagacacgtcaggtggcatgtcccatcctggcccgtcaccaggggca
ggcctgtccccagggcccatcttgggccccagccccggacccgacccctcaccaggttct
gttcacagcatgatgggccccagtcctggaccaggaacacccaacgcaccgcacggcatg
caggcccagggacaaagcgattactctcaggacaacatgtatcctatgcataagcccatg
gaggcggccatgaatgataagacgatggccgaggcgatgcatttcggtcacatgaaaggt
gtcggcatgcgatccctgcacagtggcatggggcctcctcagagcccgatggaccagcac
agccaaggatacatgtctccacatccatctccaatgggaatccatgagcatgcctccagc
cccatgtctggaggtggaggcgggccgaccccgccccacatgcctccatcccagcccggc
cccatgatgtccatggaccctcagggaggcatggccaccatgtcggggatgggccagccg
gggcgcggcccctcctccttcagccccgtccagctgcagcagctcagggcgcagatcctg
gcctataagatcctggcccgtgggcagccgctgcccgagaacctccagctggctgttcag
ggcaaaaggagcctacccacgatgcaacagcagcagcaggcgccgctgccgccgcagcaa
cagccacaacaaccacagcagcagcagcagccgccgccaccgcagcagcaagcatctggt
gctagcccgtacaggccctcaggaatgtcgatggctcccatgagcggcccccaatcgagc
ccctgcccaacaccagcactgcaaggacacaatcagagcaccggacccaagccttggact
gacggtcaagctagtgacaatcaagcacagaagcacctcaccccggtccccagtggccgc
ccgtctcccgctcccccccaggcgcctgtaggggccccgggccccgtcccggggagttca
ggggccgttcaccctccagggcagcaggtgtcgcccatgctccaaatgcagcagaagcag
aaccggatcactccggtgcagaagccccaggggttggacccggtgggaatcctgcaggag
agagagttcagactgcaggcccggatcgctcaccggatccaggaactggagagtctgccc
ggctctctgcctccggacctccgaactaaagcgacggtggagctcaaggcgctgcggctg
ctcaacttccagcggcagctgaggcaggatgtggtggcatgtatgaggcgcgacacgacc
ctggagacggccctcaactcgaaggcgtacaggcgcagcaagcggcagacgctcagggag
gcgcgcatgacggagaagctggagaagcagcagaaactggagcaggagaagaagcggcga
cagaaacatcaggaatatctcaacagtattctccaacatgccaaggactttaaggagtac
caccgctcggtgtccgggaaaatccagaaactcacccgagccgtcgccacctggcacaca
aacaccgagcgggagcagaagaaggagacggagcggctggagaaggagaggatgaagaag
ctgctggaagaggatgaggaaggctatcggaaactcattgaccagaagaaggacaagcgt
ctggcctacctgctgcagcagacggatgaatacgtggccaacctcaccactctggtgtac
gaacacaaagctgctcaggctgccaaggagaagaagaggaggaagacgaaaaagaagaag
gtggaaggagacggtgaaggtaccagcgccattggaccggacggcgagcccatggatgag
agcagccagatgagcgagctgccagtcaaagtgatccagacggagaccgggaaggtcctg
cagggcaccgacgcccccaagtccagccagctggaggcttggctggagatgaaccctggg
tatgaagtcgctccccgttcagacagcgaggaaagcggctcagagttcgaggaagaggac
gaagaggaaatgggcaaggcggaaacggaggagaagaagaaaactgatcccaacggagac
gaagaggctaagaatgacgccaagaacatcatcgagtcggccaaacaagacgtggacgat
gagtacagcgtgcccactggggagaccagctcccagtcgtactacggcgtggcgcacgcc
gtcatcgagaaggtggagaagcagtcgtctctgctgatcaacggcatgctcaaacagtac
caggtccagggtctggagtggatggtgtccctctacaacaacgacctgaacggcatcctg
gctgatgagatgggcctggggaagaccatccagaccatcgccctcatcacctacctgatg
gagcacaagaggctcaacggcccctacctcatcatcgttcctctctcgactttgtccaac
tgggtttatgaacttgacaaatgggctccttctgtggtcaaaattgcttacaagggaact
cctggtctgcgtcggggtctcgtccctcagctccgcagcggcaagtttaacgtcctcata
acgacgtatgaatacatcatcaaggacaaacacatcctggcgaagatccgctggaagtac
atgatcgtggacgagggccaccgcatgaagaaccaccactgtaagctgacgcaggtgctg
aacacccactacgtggctccgcgccgcctgctgctcaccgggacgccgctgcagaacaag
ctgcccgagctctgggccctgctcaacttcctgctgcccaccatctttaaaagctgcagc
accttcgagcagtggttcaacgcgccgttcgccatgactggagagagggttgaccttaac
gaggaagagaccatcctcatcatccgccgtctgcataaggtgctgcgcccgtttctgctc
cgcaggctgaagaaggaggtggagtctcagctgcctgagaaagtggaatacgtcataaaa
tgcgacatgtctgcgatccagagggttctctaccgccacatgcagaaaggcatcctgctg
accgacggctcggagaaagacaagaagggcaaaggcggagctaagactctgatgaacacc
atcatgcagctgaagaagatctgcaaccatccctacatgttccagcacatagaggagtct
tttgctgagcacttgggctacccgaatggcatcatcaatggccatgacctgtacagagct
tctgggaagtttgagctcctggatcggatcctaccgaagctccatgccactggacacaga
gtcctgctgttctgccagatgacgtctctgatgaccatcatggaggattacttcggctat
cgcaacttccagtatctacgccttgatggaaccaccaaatccgaggaccgagccgcactc
ctaaagaaatttaatgaggaagggtctcagtacttcatcttcctcctcagcaccagagcc
ggaggcctggggctcaacctgcaggccgccgacacggtcgtcatctttgacagcgactgg
aacccgcaccaggacctgcaggcccaggatcgggctcaccgcatcgggcagcaaaacgag
gtgcgcgttctgcgcctctgcaccgtcaacagcgtggaagagaagatcctggctgctgcc
aaatacaaactgaacgtggatcagaaagtcatccaggccggcatgttcgaccagaaatcc
tccagccacgagcggcgcgccttcctgcaggccattctagagcacgaggagcagaacgag
gatgaagacgaggtccctgatgatgaaacccttaaccagatgatagcgcgtaatgaagac
gaatttgatctgttcatgcgcatggacatggaccgtcggcgcgaggacgcccgcaacccg
aagcgtaagcctcgtctgatggaagaggacgagctgccgtcgtggatcatcaaggacgac
gccgaggtggagcggctcacctacgaggaagaggaggagaagatgttcggccgagggtcg
cgctgccggcgggacgtggactacagcgacacgctgaccgagaagcagtggctgcgggcc
atcgaggacgggaacttggaggagatggaggaggaaatccgcttgaagaagcgtaaacgc
aaacggcgccaggacaaagactcgtccagcagagacgacggcggcatgaaggccaagaag
aggcgagggcgaccgccggccgagaagctctcgcccaacccgcccaaagtcaccaagcag
atgaacaccatcatcgacacagtcatcaactacagggacgggtcaggcaggcagctgagc
gaggtgtttgtccagctgccgtccaggaaggaactgccagagtattacgagctgatcaga
aaacccgttgacttcaagaagatcaaggaacgtgtgagaaaccataaataccgaagtttg
agcgacctggagaaggacgtgatgcttctgtgtcagaacgctcaaaccttcaacctggag
ggatcccagatatacgaggactccattgttctccagtctgttttcaagagcgccagacag
aagatcgccaaggacgaagacagcgaggatgacagcgatgaggatgacgatgacgactat
gactcagaggctgaagccaagtctgtgcgggtgaagatcaagctgggtcgggacggacgc
agccacgacaaaggcaagaagaggcagagccgcggaaaggccaagccggtggtgagcgac
gacgacagcgacgacgacctggacgataacgatcagtcggataaaagcaaaagcgacgac
gacgactga
DBGET
integrated database retrieval system
