Poecilia mexicana (shortfin molly): 106933321
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Entry
106933321 CDS
T08022
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04080
Neuroactive ligand-receptor interaction
pmei04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106933321
04082 Neuroactive ligand signaling
106933321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106933321
Ion channels [BR:
pmei04040
]
Ligand-gated channels
GABA-A
106933321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
106933321
NCBI-ProteinID:
XP_014867970
Ensembl:
ENSPMEG00000014645
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MLFAKKKEMVTATRPAFIRTLVYFFCLMTCAKTISGQTRKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPVEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKRKPGKCP
PVPQSTPVKVKDTEEVQQQVPDTNGSLRKRMNYVSHQDPVGQPRAQSTTNISGLGRGRQL
RALAGGANGSSSTLSRSSPKSESLLSVASSSAQLVKGTPRPATSTPDVMAGTPGRRDAGP
ASLQHLLGPKLERIQMMGNKLEPKQTPCSQPTAAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMVAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgcaaagaagaaggagatggtgacggcgacgcgacccgcgttcattcggacc
ctggtctactttttctgtttgatgacttgtgcgaaaacaatctccggacaaacaaggaag
gatgagaggatttacccggagaattttactcggattttggaccgacttctggacggctac
gacaacaggctgcgacctggattcggaggtcctgtgacagaggtgaagactgacatttat
gtgacgagttttgggccagtctcagacgttgaaatggaatacaccatggacgtattcttt
cggcagacctgggttgatcggagattgatgtacgagggcccagtggagatactgagactt
aacaacctgatggtgaccaaggtctggacaccggacacttttttcaggaacggcaagcgg
tcagttgcccacaacatgactgctcccaacaagctcttccgcatcatgaagaacggcacc
atcctttacaccatgaggttgaccattagcgccgagtgtcccatgaagctggtggatttc
cccatggacgggcacgcctgtcccctcaagtttggaagctacgcctatcccaaaacggag
atgatctacacttggaccaaagggcctcagcattcggtggaggtccctcccgagtcctcc
agcctcgtccagtatgatctcatcggccagacggtttccagcgagaccattaaatcaatc
acaggtgaatatgtggtgatgactgtctacttccacttgaagcggaagatgggctacttc
atgattcagacgtacatcccctgcataatgacagtgatcctctctcaagtgtccttctgg
ataaacaaggagtcggtcccggcgcggaccgtttttggcatcaccaccgtcctgaccatg
acaacactcagcatcagcgcccgccactctctccccaaggtctcatacgcaactgccatg
gactggttcattgccgtctgcttcgccttcgtcttctctgccctcatcgagttcgctgcc
gtcaactatttcaccaacgcacagattgagagggccaagaggaagccaggcaagtgtccc
ccagtgccccaaagcacgcctgtcaaggtgaaggacacagaggaagtacagcagcaagtt
cccgacaccaacggctccctgaggaagcggatgaattacgtctcgcaccaagacccggtg
ggccagccgagggcccagtccaccaccaacatctcagggctgggaagaggaaggcagctg
agagctcttgccggcggcgccaacggcagctcctccaccctctcccgctccagccccaag
tccgagagcttgctgagcgtggcctcgtcctcggcgcagctggtgaagggcacgcctcgg
cccgcgacgtccaccccagacgtgatggcggggacgccgggcaggcgggacgccggcccc
gcgtctctgcagcacctgctcgggcccaagctggagcgcatccagatgatgggcaacaag
ctggagccgaagcagacgccgtgctcacagccgaccgccgccggcatgggcgggaccagc
aaaattgacaaatacgcccggatcctgttcccggtgtcctttggggcgttcaatatggtc
tactgggttgtctacctgtcgaaagacacaatggtggccaaagggggataa
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