Poecilia mexicana (shortfin molly): 106933377
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Entry
106933377 CDS
T08022
Symbol
synpo
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106933377 (synpo)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
106933377
NCBI-ProteinID:
XP_014868064
Ensembl:
ENSPMEG00000012761
UniProt:
A0A3B3X6X0
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MEKGHTSIRRGVSWSPGGLRKPIESKQEMQPTETDHNASWEKTGFSTQRISRKTNLSRSA
SLSEKELKEARLKSHIIAAQLTIPSNSGSSSRGVQLFNRRRQRVNAFTLESCGQGSEVDK
TENVKSDSLSNKQTWAERSCEDKDADLNLNNNKSHFLPAANSPSTGGIMEEENKNFIKDE
DTENYDIQERHFLPVKEEPEEEDDIKDKIHEGLEDDARHKTPLGSNDSHPAVMAHVERKT
ETSEGHPAVVPSEKLLNGCHSTSGSERISLVSPSKQTPAFLNRTARPFFSPPTVLSPDSV
NPAVDIPPPPSYATPPLPSSTQPVTFSPPPPPPSYPTPPLPAFTNRPPQSFYTSPLPMSP
PMSPPCPSPSNFPVSQHPPAPHCGPLTAPKPSTFVPQSTGERKLITPIKTGILEEGAARR
ANKKSMFTFKEKPVVAPNPELLSLVQGADERKKHGHRSVPEPAPEEELLALGAEASNFLA
KAEVKTEGARAPEWASCLKSSKTRPRLDHRPEQSLTNVSGKGAELFAKRQSRMEKYVVEN
QNPGQIRSPSPTMSLPPSWVYPSNMPGRVKAIAKNSEVSAQISQNLKAQQAVKQKPKPKV
AVPEPVPEPPTTLENGCSKIEMDLARHRPYQLNSSLFVFNPVKDPLSTLPRGTPQAKNQL
SSQSFSRQTSLPNTSPSYYGSMSPQLPLTSPRGSEYPANPASPHPRITSSMSPFSPERVS
SPRSGVQAPKPTFSAKKAGITPQELEESSPVEITGETPTATSTPSLTRRFNSPANQATRT
WISSSQTSQSSTTTSGSIRSVTSPVNLSSNARSQSFISSQNSQFSSVNSTSASRPSQAAT
AISPCSPPWGSRCQSPAVSQSFTSASIPFSKPSENSKTHYPISPPWGSRCQSPSVSNNNK
TSTASAFSVSRPSITSVATSTISPPWGSRCQSPAVSQNTQSSTFSPGPTSRPSQTPPWGS
RCQSPSVSQNNQSSAVSVSPSRPLQIFAATSPVCPPWSPRSQSPALFQSSSSFHSTNPLH
TTAAASPPRQQKDNRCTSQIVNNLDSKANHRLLAKNIINAAKRKNSPSPGAPSSHGLPIS
PVGNSQNDWQKPPISPFQQRSLGAQSPTFTSPPVTPTQRICSPVRLYNTRSLTDSDASVE
SEDSGLRSPGLHSYNTCPRGWGGSLRVKRSTVSTDL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggccatacatctatcaggagaggggtgagctggagtccaggaggattgaga
aaaccaattgagtcaaagcaagaaatgcagcccactgagaccgaccacaacgcatcctgg
gagaagacgggatttagcacacagcgcatcagccgcaaaacaaatctgagcaggagtgcc
agtttatcggagaaagagctgaaggaggcacggctgaagagtcacatcattgctgctcag
ctcaccatcccctccaactccggctccagctccaggggtgtgcagctttttaatcggcgc
aggcagagagtgaacgccttcacgctcgaaagctgcggacaagggtcagaggtggacaaa
actgagaatgtgaaaagcgactccttgtccaacaagcaaacctgggcagagaggagctgt
gaggacaaggacgcagacctgaacttaaataataataagtcacactttttgccagctgca
aacagcccttcaactggtggcataatggaagaagaaaataagaatttcatcaaagatgaa
gacacggagaactatgatatccaggaaagacacttcctccctgtcaaagaagagccggaa
gaagaggacgacataaaggataaaattcacgagggtctagaggacgatgctaggcacaaa
actcctctgggaagtaatgactctcatccagctgtgatggcacatgtcgaaaggaagaca
gaaacaagtgagggccacccggcagttgttccctctgaaaagcttcttaatggctgtcac
agcacctctggttcagagaggatttccttagtctcaccctccaagcagacacctgccttc
ctcaacagaacggctcgacctttcttctcaccaccaactgtgctctctccagattcagtc
aatcctgctgtagacatcccacctcccccatcttatgccactcctcctctcccttcttcc
actcaacctgttacgttctctcctcctcctccaccaccatcatatccaacacctcctctg
ccggccttcactaaccgacccccacagtctttctacactagtccacttccaatgtctcct
cccatgtcccctccatgcccttcgccatccaactttcctgtttcccagcacccacctgca
ccccactgtggccctctgacagctcccaagccttccacctttgttccacagtccactgga
gaaaggaagctgataacaccaatcaaaacaggaatactagaagaaggcgcagccagaagg
gcaaacaagaagtcaatgtttacatttaaagagaagccagtggttgctccaaaccctgag
ctcctctctctggtgcaaggagcggatgaaagaaagaaacatggacacagatctgtccct
gaaccagcacctgaagaggagttactggctttgggagcagaagcttccaacttccttgcc
aaagcagaggtaaagacagagggagcaagagccccagagtgggcatcctgtctcaaaagc
tcaaagaccagaccgaggctggaccaccgtccagagcagagcctcacgaatgtgtcaggc
aagggggctgaattgtttgccaagcgtcaatcaaggatggagaaatatgttgttgagaat
cagaatccaggacaaattaggtctccctcccccacaatgtctttaccaccatcctgggtt
tacccatcgaacatgccaggaagggtcaaagccattgccaagaactctgaagtgagcgca
cagatttcgcaaaatctaaaggcccagcaagccgtcaagcaaaaaccaaaaccaaaagtt
gcagtaccagagccagttccagagccaccaactactttagaaaatggctgctccaagata
gagatggacctcgcaagacaccgtccctatcagctcaactcttccctctttgtcttcaac
ccggtcaaggacccattaagcacgttacccagaggaacaccacaagcaaagaaccaactc
agcagccaaagtttttctagacagacttctctacctaacacctcaccatcttattatggc
agtatgtcacctcagttgcctctcacctccccaagaggatcagaatacccagcaaatccg
gcttccccacatccgaggatcacttcttcgatgtctcctttttctccagaacgagtttcc
tcccctcggtctggagttcaggcaccaaagccgacattttctgccaagaaggcaggaatt
acaccacaggaattagaggagtcatcccctgttgaaattactggtgaaacacccaccgca
accagtacacccagcctaaccagacgcttcaacagcccggcaaaccaagcaactagaaca
tggatctccagctctcaaacaagccagtcatcaaccaccaccagtggatctatccgttct
gtcacgtctcctgtcaatttgtccagtaatgcaagatcccagtcttttatatccagtcag
aatagccagttttcctctgttaattccacttctgcatccaggccctcccaagcagctaca
gccatttctccatgctctccaccttggggctccagatgtcagtccccagctgtcagccag
tccttcacttctgcctccattcctttttccaaaccgtctgaaaactctaaaacccattat
cctatttctcctccttggggttcaagatgccagtccccatctgtgagcaataataacaag
acctccactgcttcggctttctccgtgtccaggccctccatcacatctgtcgccacttct
acaatctcccctccctggggatcaaggtgccaatccccggcagtgagtcagaatacccaa
tcttccaccttttcccctggtcctacatccagaccttcccaaactcctccttggggatca
agatgccagtcgccttccgtaagccagaataatcaatcctccgctgtctctgtctcccca
tccagacctctgcaaatatttgcagccacatctcctgtctgccctccatggagcccccgc
tcccaatcacctgcactgtttcaaagcagctcatcctttcattccactaatcctctgcac
acaacggccgctgcctcccctccacgacaacaaaaagacaatcgctgcacgtcccagatt
gttaacaacctagactcaaaagcaaatcaccgtctccttgcaaagaatattataaatgca
gccaaacgtaaaaacagcccctcccctggagcaccgagcagtcacggcctccccatttca
cctgtgggaaactctcaaaacgactggcaaaaaccaccaattagccccttccagcagagg
tccttgggtgcacagtctcccaccttcaccagccctcctgtcaccccgactcagagaatc
tgctcgcccgtaaggctctacaacacccgttctctgaccgactccgatgcctctgttgag
tccgaggactcgggcctcaggtcgcctggcctacattcctacaacacctgcccccgtggc
tggggcggcagcctgcgggtcaaaagaagtactgtctccactgacctgtga
DBGET
integrated database retrieval system