Poecilia mexicana (shortfin molly): 106933686
Help
Entry
106933686 CDS
T08022
Symbol
ercc2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03022
Basal transcription factors
pmei03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106933686 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
106933686 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106933686 (ercc2)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106933686 (ercc2)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106933686 (ercc2)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106933686 (ercc2)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106933686 (ercc2)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106933686 (ercc2)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106933686 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SesA
Motif
Other DBs
NCBI-GeneID:
106933686
NCBI-ProteinID:
XP_014868581
Ensembl:
ENSPMEG00000002858
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAFPLDVTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGEANNFLALSLSSRKNLCIHPE
VSSLRFGKEVDGKCHSLTASYIRAQRHSNPNLPVCRFYEEFDAVGRQVPLPAGIYNLDDL
KDFGRRKGWCPYYLARYAILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQNNVDTLQNTIHKIKETDAAKLREEYRRLVEGLKEANVARE
TDIYLANPVLPDEVLQEAVPGSIRTAEHFVGFLRRFLEYLKARLRVQHVVQESAPQFLKD
IFDKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPRILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIVAFFT
SYVYMENIVASWYEQGILENIQKNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARSDKRGKLPRWIQEHINDGSLNLTVDEAVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLQSEEMLQKISQMAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacatcgagggtctgctggtctattttccttatgattacatctatccggag
cagtactcttacatgctggagcttaagaggactttggatgcaaaaggtcatggagtcctg
gagatgccgtcaggaacagggaagaccatctctctgctgtctctcatcgtcgcctaccag
agggcgtttccgctggacgtgaccaagttgatttactgctccagaacagttcctgaaatc
gagaaagttgtggaagaactcaggaagctgatggagttttatgccaaagaaacgggagaa
gcgaacaacttcctggctctgtctctgtcctccaggaagaacctctgcatccacccagag
gtcagctctctacggtttgggaaggaggtagacgggaagtgccacagtctgacggcgtcc
tacatccgcgctcagcgccacagcaatcccaacctgcctgtctgtcgcttctacgaggaa
tttgatgcggttggacgacaggttcctcttcctgccggcatctacaacctggacgacctg
aaggactttggcaggaggaaaggctggtgtccgtactatctggctcgctacgcgattctt
catgccaacatcgtcgtgtacagctaccactacctgctggacccaaagatagccgacctg
gtgtccaaggagctggccaagaagtcagtggtggtgtttgatgaggcccataacatcgac
aacgtgtgcatcgactccatgagtgtgaatataactcggcgaacgctggaccgctgccag
aacaacgtggacacgctgcaaaacacgatacacaagataaaggagacggatgccgccaag
ctgagggaggagtacagacgactggtggaggggctgaaggaagccaacgttgccagggaa
acggacatctacctggcaaacccagtgctacctgacgaggtcctgcaagaggccgttccc
ggttcgatccgtacggccgaacactttgtcggcttcctgcggcgtttcctggagtacctg
aaggcccggctgcgggtgcagcacgtcgtccaggagagcgccccgcagttcctgaaagac
atcttcgacaaagtctgcatcgacagaaagcctctcaggttctgcgcagagaggctgcag
tcgttgctgcgaactctggagatcgcagacatcgcagacttttcagccgttacgctcatc
tccaactttgcgactcttgtcagcacctacagccaaggttttaccatcatcatcgaacct
tttgaggacagaactccaaccatcgccaaccctgtgctgcacttcagctgcatggacccg
tctatcgccatcaaacctgtttttcagaggttccagtcggtcgtcatcacctcagggact
ctctctccgttggacatctacccccgcatcctcgactttcgacccgttaccatggcgtcc
ttcaccatgacgcttgcacgaacctgcctctgtcctctgattgtcggccgaggaaacgac
caagtagctctgagctcaaagttcgagacgagagaggatttcgctgtgatccgtaactat
ggcaacctcctcctggagatgtcggcggtcgttcccgacgggatcgttgcgtttttcacc
agctacgtctacatggagaacatcgtggcgtcttggtacgaacaggggatcctggagaac
atccagaaaaacaagctgatcttcatcgaaacgcaggacgcagcggaaaccagcatggct
ctggaaaagtaccaggaggcgtgtgagaacggccgaggggccatcctgctctctgtggcc
cgagggaaggtttctgaaggaatagacttcgttcaccattttggccgagcggttatcatg
tttggagtcccgtatgtttacactcagagccgcatcctgaaggctcggctggagtatctg
cgggatcagtttcagatcagagagaacgacttcctgacgttcgacgccatgcgtcacgcc
gctcagtgcgtcggcagagccatcagaggcaagacggactacggcctcatgatctttgct
gacaagagatacgctcgatcagacaaacgtgggaaacttcctcgttggattcaggagcac
atcaacgacggcagcctgaacctcaccgtggacgaagccgtccagctgtccaagcacttc
ctgcgtcagatggctcagccgttcagacaggaggaccagctgggtctgtctctgctgact
ctggagcagctgcagtcggaggaaatgctgcagaaaatctctcagatggctcatcagaca
taa
DBGET
integrated database retrieval system
