KEGG   Poecilia mexicana (shortfin molly): 106933705
Entry
106933705         CDS       T08022                                 
Symbol
nfasc
Name
(RefSeq) neurofascin isoform X1
  KO
K06757  neurofascin
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    106933705 (nfasc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pmei04515]
    106933705 (nfasc)
Cell adhesion molecules [BR:pmei04515]
 Immunoglobulin superfamily
  L1 family
   106933705 (nfasc)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 Bravo_FIGEY V-set C2-set_2 Ig_6 Ig_DSCAM-DSCAML_C Ig_4 Ig_VEGFR-1-like_5th Herpes_gE_N BiPBP_C DUF3792 TrbL_4
Other DBs
NCBI-GeneID: 106933705
NCBI-ProteinID: XP_014868616
Ensembl: ENSPMEG00000002601
LinkDB
Position
Unknown
AA seq 1402 aa
MRPVGGREMLGKVGHAALMLLSLLLLWQEAAAIEVPLDPKIQQDLKQPPTIIKQSVKDYI
VDPRDNIIIIECEAKGNPVPTFSWRRNGRLFNIGKDPRVTMRKRSGTLEVGFHNGGRPED
YEGEYQCFATNDLGVALSNKILLRVSKAPLWPKEVLAPVQVVEGSPLVLTCNPPPGLPPP
LIFWMDSNMTPIHQDRRVSMGLNGDLYFSNVLVQDGQKDYSCNARFNFTYTIQQKNPFNL
KVQTTEPYNDTSYNASDPFGGRKVAETSPSFLTPEGSGSFKMVLRDEQLLLECIAAGLPT
PSIKWFKRGGDLPAQKVKFQNFNKTLKILSVSEEDAGEYVCMADNRLGSIRHSINVQVKA
APYWLDKPTNLVLAPEENGRLVCRANGNPKPNIQWLMNGEPLNKITETPTSANREVLGDT
ILFRGVQIGSSAVYQCNASNQHGYLLANAFVSVLDMAPRMLGPKNQLIKVVMNNRTFLNC
PFFGSPLPELRWFKNGQGSGLDGGQYRAYINGTLEIKRARKEDEGIYTCVASNMLGNAEN
QVQLEVKEPTRIIQAPTHQSVLRGSKATFHCKVVSDPSLPTTVNWSKDGERLDLGWRLKK
DEESLTISSVSENDEGIYTCTVKSEIDQDSASARLTVSEDASHNPSVYSTLPPDRPDPPI
DLDLSDPSARSVRLTWIPGNDRRSPVTEFLVQFEENRWEPGRWQNLSSYPGDLNSVILQL
APNVNYQFRVIAINSVGWSQPSQPSPRYKTTAAPPDAIPRDLRGWGSNKDNMEITWEPLH
DLEKNGPNLQYNVWWRRKDSGDDWTNVTTSETKYVVRHTETYVPYEIKIQARNELGSGPE
SNIVIGYSGEDKPTDSPTELRVSKVGSTRANIHWKPVDLSSVQGEFKEYRLHYWRESSLV
PGLVVSKEKKTTGFYTTVPEPSGILKDLVPYSKYKMFMVVANSRFESLPSNNVEFTTAEG
VPDAPRFFRINRRSLDTLYLEWGKPLEPNGILIGYQLVYQRVNGSRLGPQQFETFRPNMT
DFILRLPDRSARYKFNLSALTKVGMGEVYAEESPLFSNEAENFTDATDVVELTDATLSSV
FPSTPTPLPPLPPLPPTTIPPTTISITTPTPPPTTPPPPTTTTTEATTPSTVPVLVTTKR
VDQNVLVTPRWEIWSLTVVPNSYYADVNWSHNFPADSKFTLEVTLDFNKTVAVEKEKQPP
VNLKALIAGEKYHLRVYSQELNSVSKSVTFKTKAAHIDQVDIATQGWFIGLMCAIALIIL
ILLIVCFIKRSRGGKYPSSGFLTGFTKYLVRDKKDLPLDPVDQKDQDGSFDYQNGSSVRD
RNENENSSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDK
DETEGNESSEATSPVNAIYSLA
NT seq 4209 nt   +upstreamnt  +downstreamnt
atgcgaccagttggagggagagaaatgttgggaaaggttgggcatgcagccctgatgttg
ctgtcattactgctgctgtggcaggaagcggcagccatcgaagttcctctagatccaaag
atccagcaagacttgaagcagccccccaccataatcaaacagtcagtgaaggactacatc
gtcgaccccagagataacatcatcatcatagagtgtgaagccaagggcaacccagtgcca
acgttctcatggaggaggaatgggaggttgttcaacattggcaaagaccccagagtgact
atgagaaaacgctctggaaccctggaggtagggttccataacggaggacgaccagaggac
tacgagggagagtaccagtgtttcgccacaaatgatctcggagtggccctgtccaacaaa
atactgctccgcgtctccaaggccccgttatggcctaaggaagtgctggccccggtgcag
gtggttgaaggctcccctctggtcctaacctgcaacccaccgcctggcctgcctcctcca
ctcatattctggatggacagcaacatgacccccatccatcaggacaggagggtttccatg
ggtctgaatggagacctgtatttctccaatgttttggtccaagacggtcaaaaagactac
agctgcaacgctcgcttcaacttcacatataccatccagcagaagaaccccttcaacctc
aaagttcagaccacggagccatataatgacacatcttacaatgcctctgatcccttcggt
ggccgcaaagtagcagagacgtcgccgtccttcctgactcctgaagggagtgggagcttc
aaaatggtgctacgagatgagcaattgctgctggagtgtatcgctgctgggcttccaact
ccctccatcaagtggtttaagagggggggagacctgccagcacaaaaggtgaagtttcag
aactttaataagactctgaaaattctcagtgtgtcagaggaggatgctggggagtatgtc
tgcatggcagacaaccgtctgggcagtatacgccattccatcaatgtccaagttaaagct
gctccttactggttagacaaacccacaaacctggtgctggccccagaggaaaatggccgc
ttggtgtgtcgagccaatggcaaccctaagcccaacatccagtggcttatgaacggcgag
ccattaaacaagatcacagaaactccaacaagcgcaaacagagaagttctcggtgacacc
attctgttccgcggggtgcagatcggaagcagtgcggtctaccagtgcaacgcctccaac
cagcacggctacctgctggccaacgccttcgtcagtgttctcgacatggctccacggatg
ctgggacccaaaaatcagttaatcaaagtcgtcatgaacaaccgaaccttcctcaactgc
cctttctttggctctcctttacccgagctgcgctggtttaagaatggccagggcagtggg
ctggatgggggtcagtaccgggcctacatcaacggcaccctggagataaaacgcgctcga
aaggaggatgagggcatctacacctgtgtggctagcaacatgttgggcaacgctgagaac
caggtccagctggaggtcaaagagcctactcgtataattcaagctcccacgcaccagtca
gttttgaggggctctaaagctaccttccactgtaaggtggtgtcggaccccagcctgccc
accacagtgaactggtccaaggacggagagcgcctggatctgggatggaggttgaagaag
gatgaagagtccctgactatttcgtctgtcagtgagaacgatgagggaatttacacctgc
actgttaaatctgagatagaccaggactcggcctcagcccgcctcactgtctcagaggac
gcctcccacaacccctcagtctatagtaccttacctccagaccgtccagacccaccaata
gatctggatctgtcagacccgtcagcccgtagtgttcgcctcacctggattcctgggaac
gaccgcaggagccctgtcacagagttcttggtccagtttgaggagaaccgctgggagcca
ggcagatggcagaacctgtcctcttaccctggagacctcaactccgtcatcctgcagctt
gcccccaatgtcaattatcagttcagggtcattgccattaactcagtgggttggagtcaa
cctagtcagccctcacctcggtacaaaaccactgcagcacctccagatgccatccccaga
gacctacgtggttggggatccaataaggacaacatggagatcacctgggagcctctgcac
gatctggagaaaaacggcccaaacctgcagtacaacgtgtggtggagacggaaagactcc
ggggacgactggaccaacgtgaccacgtctgagaccaaatacgtcgttcgccacactgaa
acatatgtgccttacgagataaaaatccaggccaggaatgagttgggatcaggacccgag
tctaacatcgtcattggatattctggagaggacaagcccactgattcacccactgagctg
cgggtgtcgaaggttggcagcaccagagcaaacatccactggaagcctgtagatctgagt
tctgtccagggggagttcaaggagtacagattgcactactggcgcgagtccagtctggtt
ccagggctggtggtgagcaaggagaagaagaccactggattctacacgactgtgccagaa
ccgtccgggattctcaaagacttggtgccctactctaaatataagatgttcatggttgtg
gccaacagtcgctttgagagtctacccagcaacaacgtggaattcaccactgcggagggc
gttcccgatgctcccaggttcttcaggattaaccgcagaagtctggacacactctacttg
gaatggggcaaaccattagaacccaacggcattctaattggataccaactcgtataccag
agagtgaacgggtccagactgggtccccagcagttcgagacgttccgtcccaacatgaca
gactttatcctgcgcctgccggaccggtccgctcgctacaagttcaacctgtcagcgctc
accaaggtgggaatgggagaggtctatgccgaggagtcgccgctcttttccaatgaagca
gaaaactttactgatgctacagatgtagttgagcttacggacgccaccctgtcttctgtt
ttcccttctactcccactcctcttcctccccttcctccccttcctcctactaccatccct
cccacaacaattagtattacaactcctacccctcctccaacaacccctcctcctcctact
actactaccactgaggcaactacaccctccacagttcctgtgctggtcaccaccaagcga
gttgatcagaatgtcttggtaacccctcggtgggagatctggagtctgacggtggtcccc
aacagttactacgcggacgtcaactggagtcacaacttcccagctgacagcaagtttact
ctagaggtcactctggacttcaacaaaacagtggcagttgaaaaggagaaacagccgccc
gttaatctgaaggctctgatcgctggtgaaaagtaccatctgagggtttactcccaagag
ctcaacagcgtcagcaaatctgtcacctttaaaactaaagcagctcacatagaccaggta
gacatagccactcagggctggttcattggcttgatgtgtgccattgccctcattatactg
atcctcctcattgtctgcttcatcaagaggagtcgaggaggcaaatacccaagttccggc
ttcttgactggtttcacaaaatacctcgttcgtgacaaaaaagatcttcccctggatcca
gtggatcagaaagatcaggatggatcctttgattaccaaaatggttcatctgtccgcgac
aggaacgaaaatgaaaacagcagcgacgaggacaacaagcctctgcagggcagccagact
tcgctggacggcaacgtgaaggagagcgacgacagcctcgtggactacggcgaaggcggc
gatggccagttcaacgaggacggctccttcatcggccagtacacagtgaagaaggacaaa
gacgagacggagggaaacgagagctccgaggccacctctcctgtcaatgccatctactcg
ctggcgtag

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