Poecilia mexicana (shortfin molly): 106933705
Help
Entry
106933705 CDS
T08022
Symbol
nfasc
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106933705 (nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106933705 (nfasc)
Cell adhesion molecules [BR:
pmei04515
]
Immunoglobulin superfamily
L1 family
106933705 (nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_6
Ig_DSCAM-DSCAML_C
Ig_4
Ig_VEGFR-1-like_5th
Herpes_gE_N
BiPBP_C
DUF3792
TrbL_4
Motif
Other DBs
NCBI-GeneID:
106933705
NCBI-ProteinID:
XP_014868616
Ensembl:
ENSPMEG00000002601
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MRPVGGREMLGKVGHAALMLLSLLLLWQEAAAIEVPLDPKIQQDLKQPPTIIKQSVKDYI
VDPRDNIIIIECEAKGNPVPTFSWRRNGRLFNIGKDPRVTMRKRSGTLEVGFHNGGRPED
YEGEYQCFATNDLGVALSNKILLRVSKAPLWPKEVLAPVQVVEGSPLVLTCNPPPGLPPP
LIFWMDSNMTPIHQDRRVSMGLNGDLYFSNVLVQDGQKDYSCNARFNFTYTIQQKNPFNL
KVQTTEPYNDTSYNASDPFGGRKVAETSPSFLTPEGSGSFKMVLRDEQLLLECIAAGLPT
PSIKWFKRGGDLPAQKVKFQNFNKTLKILSVSEEDAGEYVCMADNRLGSIRHSINVQVKA
APYWLDKPTNLVLAPEENGRLVCRANGNPKPNIQWLMNGEPLNKITETPTSANREVLGDT
ILFRGVQIGSSAVYQCNASNQHGYLLANAFVSVLDMAPRMLGPKNQLIKVVMNNRTFLNC
PFFGSPLPELRWFKNGQGSGLDGGQYRAYINGTLEIKRARKEDEGIYTCVASNMLGNAEN
QVQLEVKEPTRIIQAPTHQSVLRGSKATFHCKVVSDPSLPTTVNWSKDGERLDLGWRLKK
DEESLTISSVSENDEGIYTCTVKSEIDQDSASARLTVSEDASHNPSVYSTLPPDRPDPPI
DLDLSDPSARSVRLTWIPGNDRRSPVTEFLVQFEENRWEPGRWQNLSSYPGDLNSVILQL
APNVNYQFRVIAINSVGWSQPSQPSPRYKTTAAPPDAIPRDLRGWGSNKDNMEITWEPLH
DLEKNGPNLQYNVWWRRKDSGDDWTNVTTSETKYVVRHTETYVPYEIKIQARNELGSGPE
SNIVIGYSGEDKPTDSPTELRVSKVGSTRANIHWKPVDLSSVQGEFKEYRLHYWRESSLV
PGLVVSKEKKTTGFYTTVPEPSGILKDLVPYSKYKMFMVVANSRFESLPSNNVEFTTAEG
VPDAPRFFRINRRSLDTLYLEWGKPLEPNGILIGYQLVYQRVNGSRLGPQQFETFRPNMT
DFILRLPDRSARYKFNLSALTKVGMGEVYAEESPLFSNEAENFTDATDVVELTDATLSSV
FPSTPTPLPPLPPLPPTTIPPTTISITTPTPPPTTPPPPTTTTTEATTPSTVPVLVTTKR
VDQNVLVTPRWEIWSLTVVPNSYYADVNWSHNFPADSKFTLEVTLDFNKTVAVEKEKQPP
VNLKALIAGEKYHLRVYSQELNSVSKSVTFKTKAAHIDQVDIATQGWFIGLMCAIALIIL
ILLIVCFIKRSRGGKYPSSGFLTGFTKYLVRDKKDLPLDPVDQKDQDGSFDYQNGSSVRD
RNENENSSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDK
DETEGNESSEATSPVNAIYSLA
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagttggagggagagaaatgttgggaaaggttgggcatgcagccctgatgttg
ctgtcattactgctgctgtggcaggaagcggcagccatcgaagttcctctagatccaaag
atccagcaagacttgaagcagccccccaccataatcaaacagtcagtgaaggactacatc
gtcgaccccagagataacatcatcatcatagagtgtgaagccaagggcaacccagtgcca
acgttctcatggaggaggaatgggaggttgttcaacattggcaaagaccccagagtgact
atgagaaaacgctctggaaccctggaggtagggttccataacggaggacgaccagaggac
tacgagggagagtaccagtgtttcgccacaaatgatctcggagtggccctgtccaacaaa
atactgctccgcgtctccaaggccccgttatggcctaaggaagtgctggccccggtgcag
gtggttgaaggctcccctctggtcctaacctgcaacccaccgcctggcctgcctcctcca
ctcatattctggatggacagcaacatgacccccatccatcaggacaggagggtttccatg
ggtctgaatggagacctgtatttctccaatgttttggtccaagacggtcaaaaagactac
agctgcaacgctcgcttcaacttcacatataccatccagcagaagaaccccttcaacctc
aaagttcagaccacggagccatataatgacacatcttacaatgcctctgatcccttcggt
ggccgcaaagtagcagagacgtcgccgtccttcctgactcctgaagggagtgggagcttc
aaaatggtgctacgagatgagcaattgctgctggagtgtatcgctgctgggcttccaact
ccctccatcaagtggtttaagagggggggagacctgccagcacaaaaggtgaagtttcag
aactttaataagactctgaaaattctcagtgtgtcagaggaggatgctggggagtatgtc
tgcatggcagacaaccgtctgggcagtatacgccattccatcaatgtccaagttaaagct
gctccttactggttagacaaacccacaaacctggtgctggccccagaggaaaatggccgc
ttggtgtgtcgagccaatggcaaccctaagcccaacatccagtggcttatgaacggcgag
ccattaaacaagatcacagaaactccaacaagcgcaaacagagaagttctcggtgacacc
attctgttccgcggggtgcagatcggaagcagtgcggtctaccagtgcaacgcctccaac
cagcacggctacctgctggccaacgccttcgtcagtgttctcgacatggctccacggatg
ctgggacccaaaaatcagttaatcaaagtcgtcatgaacaaccgaaccttcctcaactgc
cctttctttggctctcctttacccgagctgcgctggtttaagaatggccagggcagtggg
ctggatgggggtcagtaccgggcctacatcaacggcaccctggagataaaacgcgctcga
aaggaggatgagggcatctacacctgtgtggctagcaacatgttgggcaacgctgagaac
caggtccagctggaggtcaaagagcctactcgtataattcaagctcccacgcaccagtca
gttttgaggggctctaaagctaccttccactgtaaggtggtgtcggaccccagcctgccc
accacagtgaactggtccaaggacggagagcgcctggatctgggatggaggttgaagaag
gatgaagagtccctgactatttcgtctgtcagtgagaacgatgagggaatttacacctgc
actgttaaatctgagatagaccaggactcggcctcagcccgcctcactgtctcagaggac
gcctcccacaacccctcagtctatagtaccttacctccagaccgtccagacccaccaata
gatctggatctgtcagacccgtcagcccgtagtgttcgcctcacctggattcctgggaac
gaccgcaggagccctgtcacagagttcttggtccagtttgaggagaaccgctgggagcca
ggcagatggcagaacctgtcctcttaccctggagacctcaactccgtcatcctgcagctt
gcccccaatgtcaattatcagttcagggtcattgccattaactcagtgggttggagtcaa
cctagtcagccctcacctcggtacaaaaccactgcagcacctccagatgccatccccaga
gacctacgtggttggggatccaataaggacaacatggagatcacctgggagcctctgcac
gatctggagaaaaacggcccaaacctgcagtacaacgtgtggtggagacggaaagactcc
ggggacgactggaccaacgtgaccacgtctgagaccaaatacgtcgttcgccacactgaa
acatatgtgccttacgagataaaaatccaggccaggaatgagttgggatcaggacccgag
tctaacatcgtcattggatattctggagaggacaagcccactgattcacccactgagctg
cgggtgtcgaaggttggcagcaccagagcaaacatccactggaagcctgtagatctgagt
tctgtccagggggagttcaaggagtacagattgcactactggcgcgagtccagtctggtt
ccagggctggtggtgagcaaggagaagaagaccactggattctacacgactgtgccagaa
ccgtccgggattctcaaagacttggtgccctactctaaatataagatgttcatggttgtg
gccaacagtcgctttgagagtctacccagcaacaacgtggaattcaccactgcggagggc
gttcccgatgctcccaggttcttcaggattaaccgcagaagtctggacacactctacttg
gaatggggcaaaccattagaacccaacggcattctaattggataccaactcgtataccag
agagtgaacgggtccagactgggtccccagcagttcgagacgttccgtcccaacatgaca
gactttatcctgcgcctgccggaccggtccgctcgctacaagttcaacctgtcagcgctc
accaaggtgggaatgggagaggtctatgccgaggagtcgccgctcttttccaatgaagca
gaaaactttactgatgctacagatgtagttgagcttacggacgccaccctgtcttctgtt
ttcccttctactcccactcctcttcctccccttcctccccttcctcctactaccatccct
cccacaacaattagtattacaactcctacccctcctccaacaacccctcctcctcctact
actactaccactgaggcaactacaccctccacagttcctgtgctggtcaccaccaagcga
gttgatcagaatgtcttggtaacccctcggtgggagatctggagtctgacggtggtcccc
aacagttactacgcggacgtcaactggagtcacaacttcccagctgacagcaagtttact
ctagaggtcactctggacttcaacaaaacagtggcagttgaaaaggagaaacagccgccc
gttaatctgaaggctctgatcgctggtgaaaagtaccatctgagggtttactcccaagag
ctcaacagcgtcagcaaatctgtcacctttaaaactaaagcagctcacatagaccaggta
gacatagccactcagggctggttcattggcttgatgtgtgccattgccctcattatactg
atcctcctcattgtctgcttcatcaagaggagtcgaggaggcaaatacccaagttccggc
ttcttgactggtttcacaaaatacctcgttcgtgacaaaaaagatcttcccctggatcca
gtggatcagaaagatcaggatggatcctttgattaccaaaatggttcatctgtccgcgac
aggaacgaaaatgaaaacagcagcgacgaggacaacaagcctctgcagggcagccagact
tcgctggacggcaacgtgaaggagagcgacgacagcctcgtggactacggcgaaggcggc
gatggccagttcaacgaggacggctccttcatcggccagtacacagtgaagaaggacaaa
gacgagacggagggaaacgagagctccgaggccacctctcctgtcaatgccatctactcg
ctggcgtag
DBGET
integrated database retrieval system