Poecilia mexicana (shortfin molly): 106933831
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Entry
106933831 CDS
T08022
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106933831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106933831
03021 Transcription machinery [BR:
pmei03021
]
106933831
03036 Chromosome and associated proteins [BR:
pmei03036
]
106933831
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Helix-turn-helix
ARID
106933831
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106933831
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106933831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
106933831
NCBI-ProteinID:
XP_014868819
Ensembl:
ENSPMEG00000014610
LinkDB
All DBs
Position
Unknown
AA seq
2220 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSGTLTPELNSGKSGGGGGGAGTAQRSGQMLGAGDGTLNNVD
HHRRGELGSMVHSTSATHKAPDGHDKTGINLSASNSNTSPMEAALIANHKLKCAGSGDAP
QPQQQQPPPPQFGQFAPHQQRQSNNSNNGQPSRGDRSVDHQQHGGKENLLVGQEESQQQH
GPGKGEGDLTCKATERMMGSRFEHSNLGPPTNNSEFNNSYYTSRPCYDQHGGQQQQSSGM
GVTQDSSEGGYHNNQYGQYPAYRAGYGGGAYGMIGSSGCRQPGNMMMGSNSSATHGKSPV
SGGFQRYPGQTQQQQGPSGATPTLNQLLTSPSPMMRGYGGAYQDYGGPTPQHQAGMALGK
DVGPQYGASTGHWGGQQRNHPLSMNAGSGGQGLGRTQVPSMDFMAMKRSQMYGMTNNPYS
TPQQPGAGSYPSSQPYASPPSHRYPMSMQGRSQMSMSGMQYPQQQQVAPYGQQSMGGFSR
EHQGGQQGTPPYFSPPQQTPTGPSQSSYLQPRPPPQQEAQQENYSMRGPAPGNSGKTSNE
DGVAQDRPSSLPDLSGSIDDLPTGTEAGLGSAVGAGGSSNGSSGGGSQGETGGAGNQGQS
PFSPHASPHLPGQRSGPSPSPVGSPAGSTQSQPSRSGSGPISPASGPPANTTAPGSAVAP
LSSGNGPDAAHLPITRSPMTQERGFMSMQRNQSGSQFAPPQSGPPISPHPSHGGSMYPSM
GPYSQSGPAGPYGPQGPQYGHQGNYPRPSNYIGSAGSNYSGPGLSNSLGMNATSPMHGQG
PGGRSHGPGSQNRTYPIMGPTSPSMPQPAAPGMGPPSNRKPQEGVVANSVHNRQGNYQAP
GINQVSSGSYSQPTSNNSSTTGNGPGPGYGMPPAGAVGLSGDSIMSPESKQKMDVKDDSG
PNNEPHKPKLQDGYVNNNSSSVSQPATPGGTLPVPSPLSPSPASLSSYHGDDSDSISSPP
WPLKTPCSPQKVNPNSSSIGGERISRLYELGSEPERRSWVERYLTFMEERGTPVSQLPVV
GKKPLDLWKLYVAVREIGGLAMVNKNKKWRELSGTLNVGTSSSSASTLKKQYIQYLFAYE
CKMERGEEPPTDSNSGGSLTEGDSRKQVKIQPPSPANSGGSLQGPQTPQSSGSSSTAEAA
GDLKPPTPATTPLGQVTPLPPNRSSVSVQDPFSEVSDPAFQKRTSSLPPSAPYQQALGMP
DMMMRMQYDAKDPFVGMRKMAGADPYIPSQMSSGGMQDLYSRPPSGLSMSQRSQYPYGPG
YDRRPDHLMGMEGTMGPPGSQNNMGHSNSEANMYSPSRYSSQQRHDGYSQQYPSMPYGMH
PSGMYPQQQGYKRQLDGMYGPPPKRHESDMYAMQYTNQQPDVYNHYSGGYSGPEHRPIQG
QFPYTYHRDRMAPSGQSQLSMMGGGPASNHAPEGPNMWPSRTDLSYSYHSRQGPPSQMQP
YGSICRDDIDGRSAHDHWHRQPPYISSSGGMVPMSSRHSSYSNSPTMANHLPRAPSPGAF
QRSMESRMSPSKAPFMSPMKMPKPGMAMMGSQGSGPNGQFPPNLRRDLNYPPGSVEATMP
ALKPRRKLTSKDCGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVTSFNLSQLPG
FLELIVEYFRRCLIEIFGILEEFEVRTMAPKNNLDCDYTQKENATLEKEPDSANLSASEL
SSATEMQERQTGVIKEEMSPVTEEQSEVPEKKQDPDMTKKKENSNKGQAEKGLKEVEEKE
TKKGCLDEPPAETESKPRQASKYDKLPIKIVHKDDLIEDITERLGYVTEFDSGLLHWQAG
GGDSTAHIQTHFELRSDLPPRRGNKTLNENKPENKMEGEDSKTLKHVTATIDDVLCARVD
ALSYAHPARSLPSYPFRVHPDGEDDHITLLEDEPCCLDEAPLCTTSSWQDSLSKRCLCVS
NIVRSLSFIPGNDSEMSHHPALVLLLGRLLLLHHVHPERNRSAPTYQRDEQQERGLSSSK
EEWWWECLSLLRENAMVTLSNIAGHLDLSTYSDTICLPILDGLLHWMVCPSAEAQDPFPS
TSPHSQLTPQRLVLECLCKLSIQDGNVDLLLATPPFSRQEKFFAVLVRYIGQRKAQVYRE
MAVAVLSHLAQGDPTAARAIALQKASVGNLVTFLEDGVNMAQYQQNPHNLLHMGHPPMDP
PSVNMMCRAAKGLLAMAKVEENKKEFVLYESRLLDISISSVLNTGVVAIVCQVLFHLGKL
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaactaataataaaaataagaaattatcg
ggcactttgactccggagctcaattcggggaaatccggaggaggaggtggaggggcaggg
accgcgcagcggagcggacagatgctgggtgccggcgatggaactctgaataatgtagac
catcaccgccgaggcgagctcggcagcatggtccattcaacttccgcgacgcacaaagct
ccggacggccacgacaagaccgggattaacctctcggcgtcaaactcaaacacttccccg
atggaagcggctctgatcgcgaaccacaagctgaaatgtgcggggagcggagatgcgcct
caacctcaacagcagcagccaccgccgccgcagttcggccagtttgcgccacatcagcag
cgacaaagtaacaacagcaacaacgggcagccctcccggggggacagaagtgtggaccac
cagcagcacggtggtaaggagaacctgttggtggggcaggaggagtcccagcagcagcac
ggcccggggaaaggcgagggggacctcacctgtaaagccacggagaggatgatgggctcc
aggtttgaacactccaacttgggtccccctactaacaactctgagtttaataacagctat
tacacttcaaggccgtgttatgatcagcatggcgggcagcaacaacaaagcagtggaatg
ggggtaactcaggactccagtgaaggggggtaccacaacaaccagtacggccagtacccg
gcgtaccgcgcgggctacggcggaggggcctacgggatgattggctcctctggatgcagg
cagccaggcaacatgatgatgggcagcaactcctctgcgacccacggcaagtcccctgtt
tcgggtgggtttcagaggtacccggggcaaacacagcagcaacaggggccctcaggggcc
acgccaaccctcaatcagctgctcacgtctcccagtccgatgatgcggggttacggaggt
gcttatcaggactacggcggcccgacgcctcagcatcaggcgggcatggctttggggaag
gacgtgggcccccaatatggagccagcactggccattggggagggcagcagaggaaccac
ccgctttcaatgaacgcaggcagcggagggcagggcctcggcagaacacaggttccctcc
atggatttcatggctatgaagcgctcacagatgtatggaatgaccaacaatccgtactcc
actcctcaacagccaggcgccggaagttacccctcaagccaaccatacgcatcacctcct
tcacatcgatatccaatgagcatgcaggggaggagccaaatgagcatgagtggcatgcaa
taccctcaacagcagcaggttgcaccatatggccagcagtcgatgggagggttcagcaga
gagcatcaaggagggcagcaaggaacccctccgtacttcagtcctcctcagcagactccc
acaggcccgtcccagagttcctacctgcagcctcgaccacctccgcagcaggaggctcag
caggaaaactacagcatgagaggacctgctccggggaattctgggaagaccagcaacgag
gacggagtcgcccaggaccgtccttccagtctgccggatctctctggctcgattgatgac
ctccccactgggacggaggccggcctgggctcggctgtcggcgctggcggatcctccaac
ggcagcagcggcggcggcagccaaggggagacgggaggcgccggtaaccagggacaatcc
cccttctccccccacgcctccccccacctccctggccagaggagtgggccctctccctct
ccggttgggtccccagcaggctccactcagtcccagccgtcccgttcaggctcaggacca
atttctcctgccagtggaccccctgccaacaccacagctccaggttcagctgtggccccg
ttgagctctggaaatggacctgatgcagcccatctcccaatcacacgctcccctatgact
caggagagaggttttatgtccatgcagagaaaccagtctggctcgcagttcgcacctccc
cagtccggacctcccatttcacctcacccatcccacggaggttcaatgtatcccagcatg
ggtccatattcacagagtggccctgcaggtccctatggacctcaaggaccccaatatgga
caccaaggtaactaccctcggccctctaactacattgggtcagctggaagcaactacagc
ggccccggcctgtccaacagtctggggatgaatgccactagccccatgcatggacaagga
cctggaggacggagccacggcccggggagccagaacaggacctacccaataatgggtccc
acttctcctagcatgccgcaaccagctgcaccagggatgggtcctccatctaatcgcaag
cctcaggagggagttgtagccaactcggtgcacaacaggcagggaaactaccaagcccct
ggtatcaaccaagtgagctctggctcctacagtcagccaacaagcaacaacagttcgacg
acaggcaacggaccaggtccaggctacggtatgccacctgcaggagcagtgggcctctca
ggagacagcataatgagcccagaaagtaaacagaaaatggatgtcaaagatgacagcggc
ccaaacaacgagccacacaaaccaaagctgcaggatggttacgtgaacaataacagcagc
agtgtttcccagccagccactccaggcggtaccctgcctgtgccctcccccctctctccc
agtcctgccagcctgtcttcctaccatggagacgacagcgacagcatcagtagcccaccg
tggcctctgaagaccccctgcagtccccagaaagtcaaccccaactcgtcctccattggt
ggcgagcggataagccggctgtatgaactcggttcagagccagagaggagatcttgggtg
gagcgctacctgaccttcatggaggagcggggtacacctgtttctcagctcccagttgtg
ggcaagaagccacttgatctctggaagctctatgttgctgttcgggaaataggaggcctc
gccatggttaacaagaacaagaagtggcgcgagctgtccggcactctgaatgttggtacg
tccagcagctccgccagcacgctcaagaagcagtacatccagtatctgtttgcctacgag
tgtaagatggaaagaggagaggagccaccaacagacagcaacagcggcggcagcttgact
gaaggggacagcaggaagcaggtcaagatccagccgccctcacctgccaactcaggtggc
tcactccaaggtccacaaacgccccagtcatccggcagcagctctacagcagaggcagca
ggcgacctgaaaccacccacacctgccaccaccccgctgggacaagtcactccactgccc
cccaacaggagcagtgtaagcgtacaggaccccttctcggaggtgagcgacccggccttt
cagaagcggacgagcagcctgcccccctcagctccataccagcaggccctcggcatgcct
gacatgatgatgaggatgcagtacgacgccaaggaccccttcgtggggatgaggaagatg
gcaggagctgatccatatataccaagccagatgtccagtggtggtatgcaggacttgtac
agtcggcctccatcaggcctgagcatgagccagcggtcccagtatccctatggaccgggc
tatgaccggagacctgaccatttgatggggatggagggaaccatgggtccgcctggaagt
cagaataacatgggacactctaatagtgaagccaacatgtattctcccagcagatactcc
tcacagcagagacatgacggttacagtcagcagtatcccagcatgccatatggcatgcat
ccatctgggatgtacccacagcaacagggctacaaacgacagttggatggaatgtatggt
cccccacccaaaagacacgagagtgacatgtacgctatgcagtacaccaaccagcagccg
gatgtgtacaatcactacagtggtgggtactcaggccctgaacacagacccatccaagga
cagttcccttatacgtaccatcgtgaccgaatggccccatcgggccagagccagctcagt
atgatgggtgggggccctgcttctaaccatgctcctgagggacccaacatgtggccttca
agaacagacctcagctattcctaccacagcagacaggggccaccatcgcaaatgcagccg
tatggctctatttgcagagacgacattgacggtcgctctgcgcacgaccattggcaccgt
cagcctccctacatatcatcatcaggtggcatggtccccatgtcttcacgtcactcttct
tattccaattctccaaccatggccaaccatctgcctcgagcgcccagcccaggggccttc
cagcgctcaatggaatctcgaatgtcacccagtaaagcccctttcatgtctcccatgaag
atgcctaagccagggatggccatgatgggctcacaaggcagcggaccaaatggtcagttt
cctcctaacctgagaagggacctgaactaccctccagggtcagtcgaagccacaatgcca
gctctaaagccaagacgcaagctaacatcaaaggactgtggaacacctgaagcctggcgc
gtgatgatgtctctgaagtctggcctgctggcggaaagcacttgggcattagacaccatt
aacatcctgctatatgatgacagcacagtgacctccttcaacctttcccagttgccagga
ttccttgagctaattgtggagtactttcgtcgctgcctgattgagatttttggaatcttg
gaagaatttgaggttcggacaatggctcccaaaaacaatctagattgtgattatacccag
aaagaaaatgctacccttgaaaaggaacctgactctgcaaacctatcagcatccgaatta
tcctcagcaacagaaatgcaggagaggcaaacaggagttatcaaggaggaaatgtcacct
gtcaccgaagagcaatctgaggtgccagaaaaaaagcaggatcctgatatgaccaagaaa
aaggaaaacagtaataaaggacaagcggaaaaaggactgaaagaagtggaagaaaaagaa
actaaaaaaggttgtttggatgagcctcctgcagaaacagaatctaaacctagacaggcc
agtaaatatgataaactccccattaagattgtgcacaaggacgacctgattgaagacata
actgagcgcttgggttatgtcactgagtttgacagtgggctgctacactggcaggcaggt
ggaggtgattccactgcacacattcagacgcactttgaactgcggagtgatctgccaccc
aggaggggtaacaaaacattgaatgagaacaaaccggaaaataagatggaaggggaagat
agcaaaacactgaaacacgtcaccgccactattgatgacgttctgtgcgccagggttgac
gctctgtcgtatgcccatcctgctcgatctttgccatcttaccccttcagggtgcatcca
gacggggaggatgaccacattacccttctggaggacgagccctgctgcctggatgaggct
ccgctctgcacaacctcctcctggcaggactcactctccaagaggtgcctttgtgtttcc
aacatcgtgcgaagtctgtcctttatccctgggaatgacagcgaaatgtctcaccatcct
gcgctcgttcttcttttgggccgcctgcttttgttacaccatgttcacccagagagaaac
aggtcagcaccgacttaccagagggacgagcaacaggagcggggactgtcaagtagcaaa
gaggagtggtggtgggagtgcctgagtttgctcagggagaatgccatggtcacgctttcc
aacattgcaggacaccttgatctttcaacctattcagacaccatctgcctccccatcctt
gacggccttctacactggatggtttgtccctcagctgaagcgcaggacccctttccgtca
acatccccacactcccaactcactccccagaggctggtgctggagtgcctctgtaagctc
agcatccaagatggcaatgtggacctcctgctagccacgccacctttcagcagacaggag
aaattctttgcagtcctggtgcgatacattggtcagaggaaggcacaggtgtacagagaa
atggcagttgctgttctctcacacctggcacagggagaccccaccgcagcacgtgccatc
gccttgcagaaggctagcgtgggtaacctggtaaccttcttggaggacggcgtcaatatg
gcgcaatatcaacagaacccgcacaatttgctgcacatgggacaccctccaatggaccct
cccagtgtaaacatgatgtgtcgagcagctaaaggactgttggccatggctaaagtggag
gagaacaagaaagagtttgtactgtatgaaagcagattattagacatctccatttcctca
gtgctcaatacgggggtggttgccatcgtttgccaagttctctttcacttagggaaatta
tga
DBGET
integrated database retrieval system
