Poecilia mexicana (shortfin molly): 106934102
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Entry
106934102 CDS
T08022
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106934102 (npas1)
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106934102 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
106934102
NCBI-ProteinID:
XP_014869277
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All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MASMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDNNCSKVRRSTHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRAEAGCHMAPDSASSAASTSSLAGTPEPAGPSSPHSAADDPPERGF
FIRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVALAHTLPPST
LNEVRMESNMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFVHVEDLENIRQSH
EDLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTEMPDTP
LDLLQLPESIRAERLRVSSSPTDGSPQARGQPPVKTVGKSDPDSKGREKFAAPVVQSEER
RKRLLRSDHEGAPPESRRRLEELRHTEEVVSASSDLASESEGEEEEEPEWEQGGDSDRLK
QEDSGGGGKQGRGGDAPTGGDRVGRVHNGRAVIQQLKNVVAPSTLPQSPTIKTEHEVLST
GGRWGSHTHASQPQPTHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPALSPAM
SVSSPQPREDRAVSGIVSRSAAAGGTGNGPDFELLQRLAGGAAGRVLFHPLALGPQGPQS
LYAPSTIRYAPPELPPSHHHGGGHGDSLQLRSDHHKGPPPTFFPHLQRLAGLPPFSGFSP
SDSPFSSGLPFCMNGLRGAAGTEED
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatgccgtttgtcagcgaggggaaatgtgtgagtgtggagtgggatttcctt
caaggacttctcgccaaacctcctacactaccctgtctccagaacctgcgtaaagagaaa
tctcgcaatgcagctcgttctcgacgggggaaggagaactttgagttctttgagctggct
aagatgctgcctttgccaggggccatcacgagtcagctcgacaaagcgtcagtcattcgg
ctgactatcagctatctacacatgcgcacctttgcaagccaaggagacccaccgtggagc
cctctgctggagggagacaacaactgcagcaaagttagacgatcaacccattctctggcc
actgatatgtttgagcagcacctgggggctcaccttctgcagtctctggatggctttgtg
tttgtggtcagtcaggagggacgcttcctctacatctcagagacagtttccatctacctg
gggctctcacaggtggagctgaccggcagcagcgtgttcgactacatccacccggcggac
catgtggagatggccgagcggctggggatcaagccgcatctgcgggccgaagccggctgc
cacatggcccccgacagcgcctccagcgccgcctccacctcttcactagccggtacccct
gagcctgcaggtccctccagtcctcattctgctgctgacgatcctccagaacgtggcttt
ttcatccggatgaagtccacactcaccaaaagaggcctgcatgtcaaatcctctggatac
aaggtcatccacgtgaccggtcggatccgctgccggcccgcactcgtcccgggttccacg
cgctcggtccgtcgccccatgggcctggtggctctcgcgcatacgctcccgccctccacg
ctcaacgaggtccgcatggagagcaacatgtttgtcttccgagtgaacatggacttgcag
gtcacatattgtgaaaacaggatctcagagtatatggatctgaccccagcggaagtggtg
ggacatacctgttatcatttcgtccatgtggaagatctggaaaatatccggcagagccac
gaggacctgctgaggaaaggccaggtggtgacgggctactaccgctggcttcagaggaga
ggaggctacctgtggatccagtccactgccaccgtctccatcaatcacaaagccccccat
gagcgcaacgtcatctgggtgaactacgtcctgagtcgaactgagatgcccgacacgccc
ttggatctgctgcagctaccggagagcataagagcggagagactccgagtcagctcgtcc
cccaccgacggctccccgcaggcccgaggtcaaccaccggtgaagacagtcggaaagagt
gaccctgacagcaaaggtagagagaaattcgctgcccccgtcgtccaatcagaggaaagg
aggaagcgcctgctgaggtccgaccacgagggagcgcctccggagagccgccgtcgcctg
gaggagctccgacacacggaggaagtggtgtcggcctcctcagacctcgcaagcgaaagc
gagggcgaggaggaggaagagccggagtgggagcaggggggcgacagcgacagactgaag
caggaagacagcgggggagggggcaagcagggcagaggaggggacgccccgacgggaggt
gacagagtgggccgggtgcacaacggccgggccgtcatccagcagctgaagaacgtggtg
gcgccgtccaccctgccgcaaagtcccaccatcaagactgaacacgaagtcctgtccacc
ggagggcgctgggggtcccacacgcacgcctctcagccccagccgacgcacgcacacacg
ccgtccagcagcctgaacggcgacagccccaccaccccgatcccggactcctcgtccagc
agcgaggcgccgccaaagggcctgttcacccctccgtcccccgccctgtcccccgccatg
tccgtgtcttccccacagccccgtgaggacagggccgtctccgggatagtgagccgcagc
gccgcggccggcggcaccggaaacggccccgacttcgagctgctccaaagactggcgggc
ggcgcggcgggacgggtcctcttccacccccttgccctcggcccgcagggccctcagagc
ctctacgcccccagcaccatccgctacgctccaccggagctgcccccctcccaccaccac
ggcgggggccacggcgacagcctgcagctacgctcggaccaccacaagggacccccaccg
accttcttcccgcacttacagcggctggccgggctgccacccttcagcggtttctcaccg
tctgacagccccttctcttccggcctgcctttctgtatgaacggactgaggggggccgcg
ggcacggaggaagactga
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