Poecilia mexicana (shortfin molly): 106934240
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Entry
106934240 CDS
T08022
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04517
IgSF CAM signaling
pmei04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106934240
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106934240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmei04812
]
106934240
Cytoskeleton proteins [BR:
pmei04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106934240
Intermediate filaments
Intermediate filament-binding proteins
106934240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SCAR_helical
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106934240
NCBI-ProteinID:
XP_014869494
Ensembl:
ENSPMEG00000013127
LinkDB
All DBs
Position
Unknown
AA seq
2340 aa
AA seq
DB search
MMTTVAAEYDPMELHGQYSSSDTVNNRWEDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYSNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVAKELEAERYHDIKRIAARKDNVIRLWEYLLELLKARRHRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADVAIQADRVKAVVNNANKYSVTD
SGYKPCDPQIIQDRVAHLEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSMEHGKDLTGAVRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVDAGHFGAAKIQER
ISDLQAQWVALEQLAAARKKRLQEALAMHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRSVIDSLHEQVALLPKEEAQSEDVQGRLAGIEERYKEVSELT
KLRKQALQDALALYKMMSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFENLEPEM
NNQASRVAVVNQIARQLIHSGHPSETNIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQ
NYHLDCNETKSWIKEKTKLIESTQELGNDLTGVMALQRKLTGMERDLVAIEDKLGDLRGE
AQRLAEEHPDQAGAITDRLAEIAAVWDEMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHESIKNEIHNYEEDYQKMRDMGEMVTRGQVDAQYM
FLRQRLQALDTGWNELLKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLQGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLAGDGNINAERILERVASIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGTLLVSEKPETEAVVKEKLESLHTLWEKLESTTQTKAQGLFD
ANKAELLTQSCADLDKWLGSLEGQIQSDDYGKDLTSVNILLKKQQMLENQVDVRQREVVE
LQSQVKALGQEVKDTDEVDGRRQVVEKKFQELLEPLRRRRDFLVASREVHQFNRDVEDEI
LWAQERMPVATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDILERSRSLLQDGSSN
TDLIRQRLADLQQLWKELMEEVEQRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVAAGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIADKQKKLPEEVGRDQNTVETLQRMHNTFEHDIQALGTQ
VRQLQEDAARLQSAYAGDKADDIQRREGEVLEAWRSLLEACDGRRLRLLDTGDKFRFFSM
VRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHFASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRQQEEEERMRK
PPDPEPVLIQQDGPQQQSAVTQNGLPSDRDQDSPQDAVEGGGLVNGMVERGSKDPSPGPS
PTSARKSGGSQSATLPAHSQEAPALLEGPLHRKHEWEGPNKKASNRSWHHVYCVIRGAEL
SFYKDGKAAAQGAPYHGEAPVGLKDITCDVASDYKKKKHVFKLRVSDGNEFLFQAKDEEE
MSSWIQAVLSAERPAPGAAPGTPPSGRAQTLPASVSLPAESSPGKRDKEKRFSLFSKKKQ
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacggtggcggccgagtacgacccgatggagctgcacggccagtacagcagc
agcgacaccgtcaacaaccgctgggaggacgactgggacaacgagaacagctccgcacgg
ctcttcgagcgctcgcgcatcaaggctctggcagatgaacgtgaagcagtccagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtgtcctgcaggatcaccgacctt
tacctggacctgagggacggacgcatgctcatcaagctgctggaggttctgtccggagag
agactgccgaagcccaccaaaggccggatgcgcatccactgcctggagaacgtggacaaa
gctctgcagttcctgaaggagcagcgggttcacctggagaacatgggatcccatgacatc
gtcgacggcaaccaccgactcactctgggcctcatctggaccatcatcctgcgcttccag
atccaggatatcagtgttgagactgaagacaataaggagaagcgatcggccaaggacgcc
ctgctcctgtggtgccagatgaagacggccggttactccaacgtcaacatccacaacttc
accaccagctggagagacggcatggccttcaacgccctcatccacaaacacagacctgac
ctgatcgacttcgacaagctgaagaagtccaacgctcactacaacttgcagaatgcgttc
aacctggcggagcagcacctgggcctcaccaagctgctggacccggaagatatcagcgtg
gaccatcctgatgagaagtctgtcatcacctacgtggtcacctactaccactacttctcc
aagatgaaggcgctgaaggtggagggcaaacgcatcgggaaggttctggacaacgccatc
gagacggagaagatgatcgagaagtacgagtctctggcgtcggacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagttcgccaactcgctggtgggcgtccag
cagcagctgcaggccttcaacacgtaccgcaccgtggagaaaccgcccaagttcacagag
aaggggaacctggaggttctgctcttcaccatccagagcaagatgagggccaacaaccag
aaggtctacatgccccgcgaggggaagctcatctcggacatcaacaaggcctgggagcgc
ctggagaaggcggagcatgagagggagctggctcttcggacggagctgatccgccaggag
aagctggagcagctggccagacgcttcgaccgcaaggccgccatgagggagacgtggctc
agtgaaaaccagaggctggtgtctcaggacaactttggcttcgacctccaagccgtggag
gcggccaccaagaagcacgaggccatcgagacggacatcgccgcgtatgaggaacgtgtt
caggcggtggtcgccgtggcgaaggagctggaggcggagcgttaccacgacatcaagcgc
atcgcagccagaaaggacaacgtgatccggctgtgggaatacctgctggagctgctgaag
gcccggcggcaccggctggagatgaacctgggcctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgctgctgctgtctcaggactatgggaag
cacctgctgggcgtggaagacctgctgcagaaacacgcgctggtggaggccgacgtcgcc
atccaggccgacagggtgaaggccgtcgtcaacaacgccaacaagtactcagtgaccgac
agcggctacaagccctgtgatcctcagatcatccaggaccgggtggcccacttggagttc
tgctaccaggagctgacccagctggccgctgagcgccgtgcacgtctcgaggaatctcgc
cgactctggaagttcttctgggaaatggcagaggaagagggctggatccgggagaaggag
cagatcctgtcctccatggagcacggcaaagacctgaccggggcggtgcgcctcctgagc
cagcagcgggccctggaggacgagatgagtggccgggccggacacctgcagcacaccata
gctgagggccaggccatggtggatgcgggtcactttggtgctgccaagatccaggagcga
atctcagacctgcaggctcagtgggtggcgctggagcagcttgcagcagcaagaaagaag
agactgcaggaagctctggccatgcaccagttccaggccgatgcggatgatgtggatgcg
tggacactggacgctctgcgcattgtctctagtggagagacgggccatgatgagttctcc
acccaggctctggtcaggaagcacaaggacgctgcagcagaggtggccagctaccgttcg
gtcatcgactctctgcatgagcaggtcgccctgctgcccaaagaggaggcgcagtcggag
gacgtgcagggccgcctagctggcatcgaggagcgctacaaggaagtgtccgagctcacg
aagctgaggaagcaggcgctccaggatgcactggctctctacaagatgatgagtgaggct
gacgcctgcgaggtttggatcgacgagaaggagcagtggttgaacagcatggagattcct
gagaaactggaggacctggaggtgatacagcacaggtttgagaatctggagccagagatg
aacaaccaagcgtctcgcgttgctgtggtgaaccagatcgcccgacagctgatccacagc
ggccatccgagcgagacaaacatcaagactcagcaggataaactgaacaacaggtggagc
cagttccgagacctggtggaccagaagaaggagtccctgaactctgctctgggtgtacag
aactatcatctcgactgcaatgagaccaaatcctggatcaaagaaaagaccaaactaatc
gagtccacccaggagctgggcaatgacctcaccggagtcatggctctgcagaggaagctg
accggcatggagcgagacttggtggccatcgaagacaagctgggtgacctgcggggtgaa
gcccagaggctggctgaggagcatcctgaccaggccggcgccatcacagaccggctggct
gagatcgctgccgtctgggacgaaatgaagaatactctgaaaacacgagaggagtccctg
ggcgaagccaggaagctgcagcagttcctgcgagagctagacgacttccagtcgtggctg
tcccgcacgcagacggccatcgcctccgaagacatgcccaacacgctggccgaggccgag
aagctgatggcgcaacacgaaagcatcaaaaacgagatccacaactacgaggaggactac
cagaagatgagagacatgggggagatggtgacccggggccaggtggacgcccagtacatg
ttcctgaggcagcggctgcaggccctggacaccggctggaacgagctgctcaaaatgtgg
gagaaccggcagaacctgctgtcccagtcccacgcctaccagctgttcctgagggacacc
aagcaggccgaggccttcctcaacaaccaggagtacgtgctggctcacacagagatgccc
accaccctgcagggcgccgagggcgccatcaagaagcaggaggacttcatgaccacaatg
gacgccaacgaggagaagatcaacggtgtggtggaggcaggcaggaggctggccggtgat
gggaacatcaacgctgagcggatcctggagagagtggcctccatcgacgacaggcacaag
aagaacagggaggcagcagtggagctgctgatgagactgaaggacaatcgcgatcttcag
aagttcctgcaggactgccaggagctgtctttatggatcagtgagaagatgctgacggct
caggacatgacctacgacgaggccaggaacctgcacagcaaatggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaagatccagaaggatgggacg
ctgctggtgtcagagaagccagagacggaggcggtggtgaaggagaagctggagtcactc
cacaccttgtgggagaagcttgagtccaccactcagaccaaagctcagggtctgtttgac
gccaacaaggccgagctgcttacacagagctgtgccgacttggacaagtggctgggcagc
ctggagggccagatccagtccgacgactacggcaaagacctgacatctgtcaacatactt
ctgaagaaacagcagatgctggagaaccaggtggatgtgcgccagagggaggtggtggag
ttgcagagccaagtgaaggcccttggtcaagaggtgaaggacacagatgaggtggacggg
aggcgacaggtggtggagaagaagttccaggagctgctggagccgctgcgccgtcgcagg
gacttcctggtggcgtccagagaggtccatcagttcaaccgtgacgtggaggatgagatt
ctctgggcccaggagaggatgccagtggccacatccactgagcatggacacaacctgcag
acagtccagctgctcatcaagaagaaccagacgctgcagaaggagatccagggccatcag
cctcgcatcaacgacatcttggagcgcagccgcagcctactgcaggacgggtcctccaac
accgacttgatccggcagcgcctggccgacctgcagcagctgtggaaggagctgatggag
gaggtggagcagcggcacggccgactggaggaggcccacaaagctcagcagtactacttt
gacgccgctgaggccgaggcttggatgagtgaacaggagctctacatgatgtcagaggag
aaagccaaggacgagcagagtgccgtcaccatgctgaagaagcatcagatcatggagcag
gctgtggaggactacgcagagaccgtccaccagctgtccaagaccagccgagggctagtg
gccgccggacaccctgagagcgagcggatcagcatgcgccagtctcaggtggacaagctg
tacgccggcctgaaggacctgtctgaggagaggcggggcaagctggacgagaggctccgc
ctcttccagctcaacagggaggtggacgacctggagcagtggatcgcggaacgggaggtg
gtggccgggtctcacgagctgggccaggactacgaacatgtcacgatgctgcaggaacgt
ttccgggagtttgcacgggacaccgggaacatcgggcaggagagagtggacgccgtgaat
cggctggcggacgagctaatcaacgctgggcatggcgacgcggctacggtggcggagtgg
aaggacgggctgaacgaggcgtgggctgacctgctggagctcatcgacactcggacgcag
atcctcgccgcctccttcgagctccacaagttctaccatgacgccaaggagatcctgggt
cgcatcgccgacaagcagaagaagctaccggaggaggtcggccgggaccagaacacagtg
gagacgctgcagaggatgcacaacacctttgaacacgacatccaggcgctggggacacag
gtgaggcagcttcaggaggacgccgcgcgcctgcagtcagcatacgccggagacaaagcc
gacgacatccagcggcgggagggtgaagtgctggaggcgtggaggagcctgctggaggcc
tgcgacggacgcaggctccgcctcctcgacaccggggacaagttccggttcttcagcatg
gtccgcgacctgatgctctggatggacgacgtgatccggctcatcgaggcccaggagaag
cccagagacgtttcctccgtggagctgctgatgaacaaccatcagggcatcaaggcggag
atcgacgcccgcaacgacagcttcaccgcctgcatcgagctgggcaaggcgctgctggcc
cgcaagcacttcgcctcagaggagatcaaggagaagctgctgcagctcaccgacaagagg
aaggagatgatcgacaaatgggaggaccgctgggagtggctccgcctcatcctggaggtg
caccagttctcgcgggacgcgggcgtggccgaggcctggctgctgggccaggagccgtac
ctgtccagccgggagatgggccagagcgtggacgaggtggagaagctcatcaagcgccac
gaggcctttgagaagtccgccgccacctgggaggagcgcttctccgccctggagcggctg
accacgatggagctgctggaggtcaggaggcagcaggaggaagaggagaggatgaggaag
ccaccggatccagaaccggttctgatccagcaagacggaccccagcagcaaagcgccgtg
acccagaacggactcccatcggatcgggaccaggactctcctcaggacgccgtggaaggc
ggcggcctggtgaacggcatggtggagcgcggctccaaggacccgagccccggcccctcg
ccgacctcggccaggaagtcaggcggcagccagtcggccacgctgccggcccacagccag
gaggcgccggcgctgctggaggggccgctgcaccgcaagcacgagtgggaggggcctaac
aagaaggcgtccaacaggtcctggcaccacgtgtactgtgtgattcgcggcgcggagctg
agcttctacaaggacggcaaggcggcggcccagggtgccccgtaccatggggaggcgccc
gtcggcctgaaggacatcacctgtgacgtcgcctctgactacaagaagaagaaacacgtc
ttcaagctcagagtctccgatgggaacgagtttctgttccaagccaaagatgaagaggag
atgagctcgtggatccaggccgtgctgagcgccgagcgccccgccccaggcgccgccccg
ggcacgccgccctctgggcgcgctcagacgctcccggccagcgtgtcgctgcccgccgaa
tcgagtccggggaaacgggacaaggagaaacgcttcagcctgttcagcaagaagaaacag
tag
DBGET
integrated database retrieval system
