Phyllobacterium meliloti: LLE53_004270
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Entry
LLE53_004270 CDS
T11258
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmel Phyllobacterium meliloti
Pathway
pmel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLE53_004270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmel03019
]
LLE53_004270
Enzymes [BR:
pmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLE53_004270
Messenger RNA biogenesis [BR:
pmel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLE53_004270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Fan1_SAP
Motif
Other DBs
NCBI-ProteinID:
UGX88006
LinkDB
All DBs
Position
911581..912915
Genome browser
AA seq
444 aa
AA seq
DB search
MGLNAILLKAVEAAGMATPKPIQEQAIPAQLAGQDILGIAQTGSGKTAAFSLPILQKILT
IGDKRKGKTARALILAPTRELAVQIEETVRKLSKGAHISTALVLGGVSRVAQINKMQGGV
DVLIATPGRLTDLVRDNRIDLSETRWLVLDEADRMLDMGFINDVKRIAKGTHRDRQTALF
SATMPKEVATLAESLLRNPVRVEVAPQGTTAAEIKQVVHMIPTKQKKQVLSAMLKDATLS
SVIVFTRTKHGADAVTRVLEKDGYDVAAIHGNKSQNARQRALNGFKDGSVRVLVATDIAA
RGIDVVGISHVINFDLPDEPESYVHRIGRTGRNGASGNAITLYDPAEEASKFKAVERVTR
MRLPLADSPIDLSTLPARVASNDQRPARHEGGNGAPGKKPHRGQAPGKPREPRGEKVWSN
DGGAPAQKRPFRRAKRKSFGAKAA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgaatgccatcctgctcaaagcagtcgaggcagctggaatggctactcccaag
ccaatccaggaacaggccattccggcacagctcgccggtcaggacattctcggcattgcc
cagacaggctccggcaagacggcggctttcagcctgccgatcctgcagaaaatcctgacc
atcggtgacaagcgcaagggcaagactgcccgtgctcttatcctcgcccccacccgcgaa
ctggccgtccagatcgaagaaactgttcgcaagctttccaagggcgcgcatatttcgact
gctctcgtgcttggcggcgtatcccgcgtcgcgcagatcaacaaaatgcagggcggcgtt
gacgttctcattgcaacgcccggccgtttgacggatctcgtgcgtgataaccgcattgac
ctgtcggaaacacgctggctcgttctcgacgaagccgaccgtatgctcgacatgggtttc
atcaatgatgtgaagcgcattgccaagggcacacatcgcgatcgccagaccgcgctgttc
tccgcaaccatgccaaaggaagtcgcaacgctggctgaaagcctgctgcgcaatcctgtt
cgcgtggaagtagcaccgcagggcaccacagctgctgaaatcaagcaggtcgtacacatg
atcccgaccaagcagaagaagcaggttctttcggccatgctgaaagatgcaacactgtct
tcggttatcgtctttacccgtaccaagcacggtgctgatgcagtaacccgcgttctggaa
aaggacggctatgatgtggcggccattcacggcaacaaatcacagaatgcccgccagcgc
gcgctgaacggtttcaaggatggttcggttcgtgtgctcgttgccacagatattgccgct
cgcggcattgacgtcgtcggtatcagccacgtgatcaatttcgacctgccggacgagccg
gaaagctatgtacaccgtattggccgtacaggccgtaacggtgcatcgggcaatgcgatc
acgctttatgatccagccgaagaagcatccaagttcaaggccgtcgagcgcgtcacgcgc
atgcgtctgccgctggccgattcgcctatcgatctgtcgacgcttcctgcgcgcgttgcc
agcaatgaccagcgtccagcacgccacgaaggtggcaatggcgcaccgggcaagaagccg
catcgcggtcaggcaccgggcaagccacgcgagccgcgcggcgaaaaggtctggagcaat
gatggcggcgctccggcgcagaagcgtccgtttcgccgcgccaagcgcaagagctttggc
gccaaggcagcctaa
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integrated database retrieval system
