Phyllobacterium meliloti: LLE53_005505
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Entry
LLE53_005505 CDS
T11258
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pmel Phyllobacterium meliloti
Pathway
pmel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LLE53_005505 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmel03021
]
LLE53_005505 (rpoB)
03400 DNA repair and recombination proteins [BR:
pmel03400
]
LLE53_005505 (rpoB)
Enzymes [BR:
pmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LLE53_005505 (rpoB)
Transcription machinery [BR:
pmel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LLE53_005505 (rpoB)
DNA repair and recombination proteins [BR:
pmel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LLE53_005505 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Nic96
Motif
Other DBs
NCBI-ProteinID:
UGX87290
LinkDB
All DBs
Position
1132969..1137123
Genome browser
AA seq
1384 aa
AA seq
DB search
MAQTHTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRLDEGLQAVFK
SVFPIQDFSGASMLEFVKYEFEAPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLF
AARVIPYRGSWLDIEFDAKDVVYARIDRRRKIPATSLLMALGMDSEEILSTFYNSLMFSR
DGDTWRIPFSVDRFRGFKATTDVIDADTGEVILESGKKLTARAAKQLAEKGLKFIKATED
DLFGMYLSEDIVNFETGEVYLEAGDELDEKTLKVLLDTGVTEINVLDIDHVNIGPYIRNT
LAVDKNESRQDALFDIYRVMRPGEPPTIDSAEAMFKSLFFDSERYDLSAVGRVKMNMRLD
LNAEDTVRILRKEDILAVVKMLVDLRDGRGEIDDIDNLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRRIIDGKVTDDVVYLSAMEEAKYHVAQANVELDASGAFTDEFVVCRHAGEVLMAPRENV
DLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR
DSGAAIGARRTGIVDQVDATRIVIRATEDLVPGKSGVDIYRLMKFQRSNQNTCINQRPLV
RVGDRIEKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSEKIVSDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLADVLNGKPAVAGPKSFKKGAIVTSEVMGEHPRSQWW
QFAVEDEKLQGEIEALRNQYDDSKKLLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIAAVEDMPFLEDGTHVDIVLNPLGVPSRMNVGQILETHLG
WACAGMGKKIGDLIEAYKAQYAASGAGDIQPLRATIESIIPDNDRNEPVRNYDDESIVRL
GEQMKRGVSIATPVFDGAHEPDINVMLEQAGLKASGQSTLYDGRTGETFDRQVTVGYIYM
LKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLT
VKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELDDTRQQDQQQALP
DAAE
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggctcagacccatacttttaacggtcgtaggcgcgtacgcaagtttttcggtaagatc
cctgaagtcgcagagatgccgaaccttattgaggttcagaaggcttcctacgatcagttc
ctcatggttgaggagccgaaaggcgggcgtcttgatgaaggtctgcaggctgtattcaag
tctgtgttccctatccaggatttctccggcgcttccatgcttgaattcgtcaagtatgaa
tttgaagctccaaaattcgacgttgacgaatgccgtcagcgcgatctgacctatgctgca
ccgctgaaagtcacactgcgcctgatcgtgttcgatattgacgaggatacgggcgcgaag
tcgatcaaggacatcaaggaacaggacgtttacatgggcgacatgccgctcatgaccgat
aacggcacgttcattgtcaatggtaccgagcgcgttatcgtttcgcagatgcaccgttcg
cctggtgttttcttcgatcacgacaagggcaagacccattcttcgggcaagctcctgttc
gctgcacgcgtcattccttaccgtggttcatggcttgacatcgaattcgatgccaaggac
gtggtctatgcgcgtatcgatcgccgccgcaaaattcctgcgacatcgcttctgatggcg
ctgggcatggacagcgaagaaatcctgtcgaccttctacaattcgctgatgttcagccgt
gatggcgatacctggcggattcctttctccgtggatcgtttccgtggtttcaaggcaacg
acagacgttatcgatgccgataccggtgaagtcattctcgaatccggcaagaagctgaca
gcccgtgctgccaagcagcttgctgaaaagggcctgaagttcatcaaggcaacggaagac
gatctgttcggcatgtacctgtcggaagacatcgtcaatttcgaaaccggtgaagtctat
cttgaagccggtgacgagcttgacgaaaagacgctgaaggttctgctcgatacgggtgtg
accgagatcaacgttctcgatatcgaccatgtcaatatcggaccatatatccggaacacg
cttgctgttgacaagaacgagagccgtcaggacgcactgtttgacatctaccgcgtcatg
cgtcccggtgagccgccgacaattgactcggctgaagccatgttcaagtcgctgttcttt
gactcagagcgttatgatctctcggctgttggccgcgtgaagatgaatatgcgtctcgac
ctgaatgcggaagatactgttcgcattctgcgcaaggaagacatccttgccgtggtcaag
atgctggttgatctgcgcgatggtcgcggtgaaatcgacgatatcgacaatctcggcaac
cgccgtgtgcgttcggtcggcgaattgatggaaaaccagtaccgtgttggtctgctccgc
atggagcgtgccatcaaggaacgtatgtcatccatcgagatcgacaccgtgatgccgcag
gacctgatcaatgcgaagccggcagccgccgcagttcgcgagttcttcggttcctcgcag
ctgtcgcagttcatggatcagaccaacccactttcggaaatcacccacaagcgccgtctt
tcggctcttggacccggtggtctgacccgtgagcgtgctggctttgaagtgcgcgacgtg
catccgacccactatggccgtatctgcccgattgaaacgcctgaaggcccgaatatcggt
ctgatcaactcgctcgcaacctttgcccgggtcaacaagtatggctttatcgaaagcccg
taccgccggatcatcgatggcaaggtaacggatgacgttgtctatctgtcggctatggaa
gaagccaagtatcacgtggcgcaggccaatgtggaactggacgcttccggcgccttcacg
gatgaattcgttgtttgccgccatgcgggtgaagttctcatggctccgcgtgaaaacgtg
gatctgatggacgtttcgccgaagcagctcgtatcggttgccgcagcgcttattccgttc
ctggaaaacgacgacgccaaccgcgctctgatgggctcgaacatgcagcgtcaggccgtt
cctctggttcgtgctgaagcgccattcgttggtacaggcatggagccgattgttgcccgt
gactccggtgcggctatcggtgcgcgccgtacaggtatcgtcgatcaggttgacgcgacc
cgtatcgttatccgtgcaacggaagacctcgtaccgggcaagtcaggcgttgatatttat
cgcctgatgaagttccagcgttcgaaccagaacacctgcatcaatcagcgtccactggtt
cgtgttggcgaccggatcgaaaagggcgacattattgctgatggtccttcgacggatctg
ggtgatctggcgctcggccgcaacgtgctcgtcgcgttcatgccctggaatggctacaac
tacgaagattccatcctgctgtctgaaaagatcgtttcggatgacgtcttcacctcgatc
catatcgaggagttcgaagtcatggcccgcgatacgaagcttggaccggaagaaatcacg
cgcgacattccgaacgtttcggaagaagcactgaagaatctggacgaagccggtatcgtg
tacatcggtgcggaagttcagccgggcgatattctcgtcggcaagatcacaccgaagggc
gaaagcccgatgacgccggaagagaagcttctgcgcgccatcttcggtgaaaaggcttcc
gatgtccgtgacacctcgatgcggatgccgcccgggacttacggtacggttgtggaagtt
cgcgttttcaatcgccacggcgttgaaaaggacgaacgtgccatggctatcgaacgcgag
gaaatcgagcgtttggccaaggaccgtgacgacgaacaggctattcttgaccgcaacgtc
tatggccgtctggctgacgttctcaatggcaagcctgctgttgccggaccgaagtcgttc
aagaagggcgcaattgttacttcggaagtcatgggtgaacacccgcgctcccagtggtgg
cagtttgctgtcgaggacgagaagcttcagggcgaaatcgaagctctgcgtaaccagtat
gacgactccaagaagctgcttgaacagcgcttcatggacaaggtcgaaaaggtacagcgc
ggcgacgagatgcctccgggcgtcatgaagatggtcaaggtctttgttgctgtgaagcgc
aagatccagccaggcgacaagatggctggccgtcacggcaacaagggcgttgtctcgcgt
attgccgccgttgaagatatgccgttcctcgaagacggaacgcatgttgacatcgtgctc
aatccgcttggcgtgccaagccgcatgaacgttggccagattctggaaacgcatctgggt
tgggcctgtgccggaatgggcaagaagatcggtgatctgatcgaagcctacaaggcacag
tatgctgcaagtggtgcaggcgatatccagccgctgcgggcgacgatcgagtcgatcatc
cccgacaacgaccggaatgagccagtgcgcaactatgacgacgagagcatcgttcgtctt
ggtgagcagatgaagcgtggcgtgtcgattgcaacgccggtgtttgacggtgcgcatgag
ccagacatcaatgtgatgctggagcaggcgggtctgaaggcctccggtcagtcgacgctc
tatgacggacgtacgggtgaaactttcgatcgtcaggttactgtcggctacatctatatg
ctgaagctgcaccacctggttgacgacaagatccacgcccgttcgatcggaccatactcg
ctcgttacgcagcagccactgggtggtaaagcccagttcggcggtcagcgcttcggtgaa
atggaggtctgggcactggaagcatacggtgcggcttacacgctgcaggaaatgctcacg
gtcaagtccgatgacgttgccggtcgtaccaaggtctatgaagcgatcgtccgtggtgac
gatactttcgaggccggtatccccgagagcttcaacgttctcgtcaaggaaatgcgttcg
ctcggtctcaatgtcgagctggacgatacacgccagcaagaccagcagcaggccttgcct
gacgcggcagagtaa
DBGET
integrated database retrieval system
