Phyllobacterium meliloti: LLE53_005510
Help
Entry
LLE53_005510 CDS
T11258
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmel Phyllobacterium meliloti
Pathway
pmel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LLE53_005510 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmel03021
]
LLE53_005510 (rpoC)
03400 DNA repair and recombination proteins [BR:
pmel03400
]
LLE53_005510 (rpoC)
Enzymes [BR:
pmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LLE53_005510 (rpoC)
Transcription machinery [BR:
pmel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LLE53_005510 (rpoC)
DNA repair and recombination proteins [BR:
pmel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LLE53_005510 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
UGX87291
LinkDB
All DBs
Position
1137268..1141476
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQVPVQAFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKGIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA
LIGAEAIHELLASMDLEKIAGDLRAELAETTSDLKQKKLMKRLKIVENFLESGNRPEWMI
MKIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGLPVIVPSQDMVLGLYYLSIVAAKEPGEGMAFADIGELHHAIG
SGAVTLHTKIKGRFKSIDADGKPTSKIYDTTPGRMIIGELLPKHHNVPFDICNQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMQLGFSHACRAGISFGKDDMVIPDTKAKLVAETEAL
ATEYEQQYNDGLITQGEKYNKVVDAWGKCTEKVADEMMARIKAVEFDPVTGRQKQMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVISVDCGTTTGLTMQPIVDAGQVVATIGQRVLGRT
ALEDILHPVSGDVLVTGGNIIDEFDIDAIEKAGVQSIRIRSALTCETRGGICAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDQSFLEASYEGTVQIRNRN
VVRNSDGHLVVMGRNMAVVILDATGKERATHRVTYGSRIYVDDGDTVKRGQRVAEWDPYT
RPVMTEVEGHVEFEDMVDGLSVSETTDESTGITKRVVIDWRSTPRGSDLKPCIVVKDKAG
KVLKLAKGGDARFQLSVESILSVEPGSHVKAGDVLARIPMESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTVRFGRDYKNKRRIVIEPNDETLEPVEYLIPKGKPFHLQDGDAIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVE
ITESGDTGFIAGDHVDRIELDEINERLEEDGKKSGYGTPVLLGITKASLQTPSFISAASF
QETTRVLTEAAVAGKMDALQGLKENVIVGRLIPAGTGGTVKQIRRIAGARDELIIDERRK
ESGAGAAKVDAMLTDMTGTPAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatctcttcaatcctcaggtacctgtgcaggcattcgattcc
atccggatttcgatcgccagccctgagaagattctgtcctggtcatacggtgagatcaag
aagccggagacgatcaactaccgcacattcaagcctgagcgggatggtctcttctgtgct
cggatcttcgggccgatcaaggactatgaatgcttgtgcggcaagtacaagcgtatgaaa
tacaagggcatcatctgcgaaaagtgcggtgtggaagtcacgctgtcacgcgttcgccgt
gagcgcatgggccatatcgaactcgcagctccggttgcgcatatctggttcctgaagtcc
ctgccaagccgtatcggcactctgctcgacatgaccctcaagggtatcgagcgcgttctc
tatttcgagaactatattgtgaccgagcccggcctgacagccctgaaagaacatcagctt
ctttccgaagaagaatacatgatcgctgtcgatgagtatggtgaagattccttcaccgcg
ctgatcggtgcggaagctattcatgagcttctggcttccatggatctggagaagattgcc
ggcgatctgcgtgcagaacttgccgaaacaacttctgatctgaagcagaagaagctgatg
aagcgtctgaagatcgtcgaaaacttcctggaatcggggaaccgtccggaatggatgatc
atgaagatcgttccggtcattccgccagacctgcgcccgcttgttccgctggatggcggc
cgctttgcgacgtctgatctgaacgacctctatcgtcgtgtgatcaaccgtaacaaccgt
ctgaagcgcctgattgaactgcgcgcacctggcatcatcatccgcaacgagaagcgtatg
cttcaggaatcggttgatgctctgtttgacaatggccgtcgtggccgcgtcatcaccggt
gccaacaagcgtccgctgaagtcgctgtccgatatgctcaagggcaagcagggccgcttc
cgtcagaacctgcttggcaagcgcgtcgattactcgggccgttcggttatcgtgacgggt
ccggagctgaagctgcaccagtgcggactgccgaagaagatggcgctcgaactgttcaag
ccattcatctacgcccgtctcgacgccaagggttattcctcgactgtcaagcaggcgaag
aagctggttgaaaaggaaaagccggaagtctgggatatccttgacgaagtcatccgcgag
catccggttcttctgaaccgtgcgccgacgctgcaccgtcttggtattcaggcattcgaa
cccatcctgatcgaaggcaaggcaatccagctgcatccgctcgtctgtaccgctttcaat
gcggactttgacggtgaccagatggctgttcacgttccgctttctctggaagcgcagctt
gaagcccgcgttctgatgatgtcgacgaataacatcctgcaccctgcaaacggtctgccg
gttatcgttccgtcacaggacatggttctcggcctgtactatctgtcgatcgttgcggcc
aaagagccgggcgaaggcatggcctttgccgatatcggtgaattgcatcacgccattggc
agcggtgcagtgaccctgcatacgaagatcaagggccgcttcaagagcattgatgccgat
ggcaagccgacgtcgaagatctatgatacgacccctggccgtatgatcatcggtgaactg
ctgccgaagcaccacaatgtgcctttcgacatctgcaatcaggaaatgaccaagaagaac
atctccaagatgatcgacacggtttatcgccattgcggacagaaagagacggtcattttc
tgcgatcgtatcatgcagctcggcttctcccatgcctgccgcgccggtatttccttcggc
aaggacgacatggtcattccggataccaaggcgaagctggttgctgaaaccgaagctttg
gcgaccgaatatgagcagcagtacaatgacggcctgatcactcagggcgagaagtacaac
aaggttgttgacgcttggggcaagtgcaccgagaaggtcgctgacgaaatgatggcccgc
attaaggctgtcgagttcgatcctgttactggtcgccagaagcagatgaactcgatctat
atgatgtcgcactcgggtgctcgtggttcgccgaaccagatgcgccagctgggcggtatg
cgcggactgatggccaagccttcgggcgaaatcatcgaaacgccaatcatttcgaacttc
aaggaaggcctgaccgtgaacgagtacttcaactcgacacacggtgcccgtaagggtctt
gccgataccgccttgaagacggctaactccggttatctgacacgtcgtctcgttgacgtc
gcgcaggattgcattgtcatctcggtggattgcggcacgacaacgggcctcaccatgcag
ccgatcgttgatgccggtcaggtcgttgcgaccattggccagcgtgttctcggccgtacg
gcgcttgaagacatcctgcatccggtttcgggtgacgttctggttaccggcggcaacatc
atcgacgagttcgatattgatgccatcgaaaaggcaggcgttcagtccatccgcatccgt
tcggctctcacctgtgagacccgtggcggcatctgtgcgaagtgctacggccgcgatctg
gcccgtggtacacctgtcaatcagggtgaagctgtcggcgttatcgctgctcagtcgatc
ggtgagcctggcacacagctgaccatgcgtacgttccaccttggtggtacggcgcaggtt
gtggatcagtcgttcctcgaagccagctatgaaggcacagtgcagatccgtaaccgcaat
gtggtgcgcaactccgatggccatctggtcgtcatgggtcgtaacatggctgttgtcatc
cttgatgcgacaggcaaggaacgcgcaacacaccgcgtcacctacggttcgcgcatctat
gtcgatgatggcgatacggttaagcgcggccagcgtgttgccgagtgggacccatatacc
cgtccagtcatgacggaagtcgaaggtcatgttgaattcgaagacatggttgacggtctt
tccgtttcggaaacgacggacgagtccaccggtatcaccaagcgcgtggttatcgactgg
cgttcgacccctcgcggttcggatctgaagccttgcatcgttgtcaaggacaaggccggc
aaggttctgaaactggcaaagggtggcgatgcccgcttccagctgtcggttgaatcgatc
ctttcggttgagcccggttcccatgtgaaggcgggtgacgttcttgcccgtattccaatg
gaaagcgccaagaccaaggacatcaccggtggtctgccgcgcgttgcggaactgttcgaa
gcacgtcgtccaaaggaccatgcgatcatcgccgaaatcgatggtacggttcgttttggc
cgcgactacaagaacaagcgccgcatcgtcatcgaaccgaacgacgagacgctcgagcct
gttgagtatctgatccccaagggtaaacctttccatcttcaggatggcgatgcgatcgaa
aagggcgattacatcctcgacggcaatccagcgccgcacgacattctggccatcaagggc
gtggaagcacttgcttcgtacctcgtcaatgaaatccaggaagtctatcgtctgcagggc
gttctgatcaacgacaagcacattgaagtgattgtccgtcagatgctccagaaggtcgaa
atcaccgaatccggtgacactggcttcatcgctggtgatcatgttgaccggatcgagctt
gatgagatcaacgaacgtcttgaggaagatggcaagaagtcgggctatggtaccccggtt
ctcctgggtatcactaaggcttcgctgcagacaccgtcgttcatctcggcagcgtccttc
caggaaacaacacgcgtccttacggaagctgctgttgccggcaagatggatgcgttgcag
ggcctgaaggaaaacgtgatcgttggtcgtctgatcccggctggtacgggtggcacggtc
aagcagatccgccgcattgccggtgcccgcgacgaactgatcatcgacgagcgccgcaag
gaaagcggagccggtgctgccaaggtcgacgccatgttgaccgacatgacaggcaccccg
gccgaataa
DBGET
integrated database retrieval system
