Phyllobacterium meliloti: LLE53_012650
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Entry
LLE53_012650 CDS
T11258
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmel Phyllobacterium meliloti
Pathway
pmel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLE53_012650 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmel03019
]
LLE53_012650 (pnp)
03016 Transfer RNA biogenesis [BR:
pmel03016
]
LLE53_012650 (pnp)
Enzymes [BR:
pmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LLE53_012650 (pnp)
Messenger RNA biogenesis [BR:
pmel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LLE53_012650 (pnp)
Transfer RNA biogenesis [BR:
pmel03016
]
Prokaryotic type
tRNA degradation factors
LLE53_012650 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
UGX85309
LinkDB
All DBs
Position
complement(2570042..2572186)
Genome browser
AA seq
714 aa
AA seq
DB search
MFNQHKVEIEWGGRPLILETGKIARQADGAVLATYGETVVLATVVSAKEPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFADGYKNDTQVVLTVIQH
DLENNPDIVSLIGASAALTLSGVPFMGPIGGARVGYIGGEYRLNPTVDEMVESSLDLVVA
GTGEAVLMVESEAKELAEDVMLGAVMFGHKSFQPVIDAIIKLAEVAAKEPRDFHAEDLSA
VEAAVLKVCEADLRTAYKITDKQQRYVAIDAAKAKVKAHFFPEGVEEPEFSSEQIATVFK
SVQAKIVRWNILDTGSRIDGRDLSTVRAIVSEVGLLPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKETFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPVLPAK
EQFPYTLRTVSEITESNGSSSMATVCGTSLALMDAGVPLLRPVAGIAMGLIKEEERFAVL
SDILGDEDHLGDMDFKVAGTESGITALQMDIKIDGITEEIMKVALGQAKDGRLHILGEMA
KAITEGRSELGEFAPRIEVMNIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSSAKEIEAARKWIHSIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLASER
VAKTSDVVKEGQKVWVKLMGFDERGKVRLSMKVVDQETGKEIVQEKKQAEEDAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcaacacaaagttgaaatcgaatggggcggtcgtccgctcattctggaaacg
ggcaagattgcccgccaggccgacggcgcagttctcgccacttacggcgagaccgtggtt
cttgccactgttgtttccgccaaggaaccaaagccaggtcaggatttctttccgctgacc
gtaaattatcaggaaaagacctacgcagccggcaagatccccggtggctacttcaagcgt
gaaggccgtccaagcgaaaacgaaacactggtttcgcgcctcatcgaccgcccgatccgc
ccgctctttgctgatggctacaagaacgacacacaggttgttttgaccgttatccagcac
gatctcgaaaacaacccagatatcgtttcgctcatcggtgcttctgcagcgctgacgctg
tcaggcgttcccttcatgggcccgatcggcggcgcacgcgtcggctatatcggcggtgaa
tacaggttgaacccgaccgttgacgaaatggtcgagtcgagcctcgatctcgttgttgcc
ggtacaggcgaagcggttctgatggttgaatcggaagccaaggaattggctgaagacgtc
atgctcggcgccgttatgttcggtcacaagagcttccagccggttatcgatgcgatcatc
aagcttgctgaagttgctgccaaagagccacgcgatttccatgcggaagacctttccgct
gttgaagctgctgttctcaaggtttgcgaagctgatctgcgcacagcctataagatcact
gacaagcagcagcgttatgtggcgattgatgctgccaaggccaaggtcaaggcacatttc
ttcccggaaggcgttgaagagccggaattctcctccgagcagatcgcaaccgtgttcaag
tcggttcaggcgaagatcgttcgctggaacattcttgacactggcagccgtattgatggc
cgtgatctgtcgacagttcgtgcaatcgtatcggaagttggccttctgccacgcacccac
ggttcggccctgttcacccgcggtgaaacacaggccatcgttgttgcaacgctgggcacc
ggcgaagacgaacagtatgtcgactcgctgaccggcatgtacaaagaaaccttcctgctt
cactacaatttcccgccctattcggtcggtgaaacaggtcgcatgggttcgcccggccgc
cgcgaaatcggtcacggcaagctcgcttggcgcgctatccatccggttctgcctgccaag
gaacagttcccctacacactgcgcacggtttcggaaatcaccgaatccaatggttcgtcg
tcaatggcaaccgtttgcggcacctcgcttgccctgatggatgccggcgttccgctgctc
cgtccagttgcaggtatcgccatgggcctgatcaaggaagaagagcgtttcgctgttctc
tctgacatccttggcgatgaagatcacctcggcgacatggatttcaaggttgcgggtact
gaaagcggtatcacagcgctccagatggacatcaagatcgacggtatcaccgaagagatc
atgaaggttgctctgggtcaggccaaggacggccgtctgcacatcctcggcgaaatggcg
aaagccatcaccgaaggccgttcggaacttggcgaatttgctccgcgcattgaagtcatg
aacatcccgaccgacaagatccgtgatgttatcggttccggcggcaaggtcattcgtgaa
atcgtcgaaaagaccggcgcgaagatcaacattgaagatgatggcacggtcaagatcgcg
tcttcctctgccaaggaaatcgaagccgcccgcaagtggattcactcgatcgttgctgaa
cctgaagtcggcgaaatctacgaaggcacagtcgtcaagaccgctgacttcggcgcattc
gtcaatttcttcggcccgcgcgatggtctggtccatatttcccagctcgcttccgagcgc
gttgccaagacctccgatgtggtcaaggaaggccagaaggtctgggtcaagctcatgggc
tttgacgaacgtggcaaggttcgcctgtcgatgaaggttgtcgatcaggaaaccggcaag
gaaatcgttcaggaaaagaagcaggctgaagaagacgctgaataa
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