Phyllobacterium meliloti: LLE53_017820
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Entry
LLE53_017820 CDS
T11258
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmel Phyllobacterium meliloti
Pathway
pmel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLE53_017820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmel03019
]
LLE53_017820
03009 Ribosome biogenesis [BR:
pmel03009
]
LLE53_017820
Enzymes [BR:
pmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLE53_017820
Messenger RNA biogenesis [BR:
pmel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLE53_017820
Ribosome biogenesis [BR:
pmel03009
]
Prokaryotic type
rRNA helicases
LLE53_017820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UGX86251
LinkDB
All DBs
Position
complement(3611256..3613214)
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AA seq
652 aa
AA seq
DB search
MTIFDSIAPALSGALAARGYETLTPVQTAVLAPEADGADLLVSAQTGSGKTVAFGIAIAP
TLLEGEDRFTSIGAPYALVIAPTRELALQVRRELEWLYEKTGARIASCVGGMDMTKERRA
LQGGAHIVVGTPGRLRDHITRGSLDMTELRAVVLDEADEMLDLGFREDLEFILGEAPKDR
RTLMFSATVPKPIAQLAKQFQNDALRITATSEKSQHSDIEYHIMPVAPRERENAIINALL
FYDAQNTIVFGSTREAVKHLTSRLSNRGFSVVSLSGELSQAERTNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPTNPDTLLHRSGRTGRAGRKGICVLIVPASRRRSAERLL
QMAKLSTTMVPPPDAAAINKRNYDRILNDASLTEVMTEEEGDHVRELLALHSPEQIAAAY
MRQQMAARPAPEELSNTPAHVLEPIRKGSYDDRPGRGDRNDRGDRAPRSDRFEQFESGAW
FSLSVGRKQRAEPRWLLPLICKAGDITKTDVGSIKILETETRFEITASKADAFLARIKQY
GTGEKGVNITRSEGAGSSSPRSDFKPKKNFAEKREWDDRKPARARDDRPRSYDDKPKADW
AAKPAKAKPEGWTTEKPEKVKKAPKERKPGEPSGFDKYKAKKARKAAAGQAE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgactattttcgattctatcgccccggcgctgtccggtgcattggcagcccgtggttac
gagaccctgacgcccgtgcagaccgctgtgcttgctccggaagcagatggtgccgacctt
ctcgtttccgcccagacaggctcaggcaagacagtggcattcggtattgccattgcaccg
acgctgcttgaaggcgaagaccgctttacctctattggcgcaccctatgcgctggtcatt
gccccgacccgcgagcttgctttgcaggtacgccgcgagctggaatggctctacgaaaag
acaggcgcgcgcattgcctcctgcgtcggtggcatggacatgaccaaggaacgccgtgca
ttgcagggcggcgcccatatcgtcgtcggcacgccgggccgtttgcgcgaccatatcact
cgcggttcgctcgatatgaccgaactgcgcgccgtcgttctcgacgaagccgacgagatg
ctcgaccttggtttccgtgaagaccttgaatttattctcggcgaagcaccaaaagatcgc
cgcacgctgatgttctcggcgacggtccccaaacccattgcccagttggcaaaacagttc
cagaacgatgcactgcgcatcacagccacaagcgaaaagtcccagcacagcgatattgaa
tatcacatcatgccggtcgccccgcgcgaacgcgaaaatgcgatcatcaatgcgttgctt
ttctatgatgcacagaacaccatcgtgttcggctcgacccgtgaagcggtcaagcacctg
accagccgcctgtcaaatcgcggtttctccgttgtttcgctctcaggcgaactcagccag
gccgagcgcaccaatgcgctgcaggccatgcgcgatggtcgtgcccgcgtttgcgttgcc
accgacgttgccgcccgcggtatcgatctgcccaatctcgacctcgttatccacgccgac
ctgccaaccaaccccgatacactgctgcaccgcagtggccgtacgggacgcgcgggccgc
aagggcatctgcgttttgatcgtaccggcatcgcgccgccgctccgccgagcgcctgctg
cagatggccaagctcagcaccactatggtgccgccgccggacgctgccgccatcaacaag
cgcaattatgaccgtatcctcaacgacgcgtcactgaccgaagtcatgaccgaagaggaa
ggcgatcatgtccgcgaattgctcgcgctgcattcgccagaacagatcgccgccgcctat
atgcgtcagcaaatggctgcacggcctgcgccggaagaactgtcgaacacaccagcccac
gtcctcgagccgatccgcaagggaagctatgacgaccgtccgggccgcggtgatcgtaat
gatcgcggcgaccgtgctccccgttcggaccgttttgaacagtttgaaagcggcgcctgg
ttctcgctcagcgtaggccgcaaacagcgtgccgagccgcgttggctgcttccactgatc
tgcaaggctggcgatatcaccaagactgatgtcggctcgatcaagattcttgagactgaa
acccgcttcgaaatcaccgccagcaaggccgatgcatttctggcccggatcaagcagtat
ggcaccggcgaaaagggcgtgaacatcacccgcagcgagggcgcaggatcatcctcccca
cgcagcgatttcaagccgaagaagaactttgccgagaagcgtgaatgggacgaccgcaaa
ccggcccgcgcccgcgatgatcgtccccgttcctatgacgacaagccaaaagccgattgg
gctgccaagccagccaaagccaagccggaaggctggaccacggaaaagcctgaaaaggtc
aagaaggccccaaaggaacgcaagcccggcgaaccctccggctttgacaaatacaaagcc
aaaaaagcccgcaaggctgctgccggtcaggctgaataa
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