Puribacter membranae: HTMS3_12510
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Entry
HTMS3_12510 CDS
T11903
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
pmem Puribacter membranae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_3
HHH
DUF4874
Fur_reg_FbpA
DUF1803
DUF6801
Motif
Other DBs
NCBI-ProteinID:
BGB71158
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Position
complement(1264550..1266631)
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AA seq
693 aa
AA seq
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MSNLDLFSDLPEPALTIEQQITQLREQLRAHNVAYYVNDAPTVSDAEYDALFRELEALEQ
AHPQFSSADSPTQRVGGAPLSQFAKVRHRVPMLSLANAFSDAEVRAFDQRMQDELRSAGL
LAEGQRVEYACEVKFDGLAINLRYEQGVLVQAATRGDGETGEDVTANVRTIRSIPLRLQG
KQFPEVLEVRGEVLMKRSDFERLNLTQADKGEKQFANPRNAAAGSLRQLDSRITASRKLS
FFAYGLGEMQDSVEVFQTDGFAHIVAQLRDLGFPVFTAQPLVSGAEGLLDFYAQTGARRN
ELPFDIDGVVYKVNDSAQQEALGFVSRSPRWAIAHKFPAQEMTTVVQDITVQVGRTGAIT
PVARLLPVEVGGVIVTNATLHNADEVARKDVRIGDTVVVRRAGDVIPEVVMSIIEKRPLD
ARVFIMPTQCPECASPIVREAGEAVARCTGGLICPAQLKQSLMHFASRKAVNIDGLGDKL
IEQLVDVGLVKTPDDLYRLTVEQLAQLDRMAQKSAQNVFDAIQTSKETTLARFVYALGIR
HVGEATAKSLAQHFRTLAAIRAAHAEELLMVADIGPVVAQAIVDFWADARHQSVTERLLQ
LGVHWDELPEQAASDSAFAGKTVVLTGTLPTLARDAAKALLETAGAKVAGSVSAKTDYVV
AGESAGSKLDKANALGVRVIDEAQMLALLNQAN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttagatttattttccgatttgcccgagcctgcgctgactatcgaacagcaa
atcacgcaactgcgcgagcagttgcgcgcgcacaacgttgcctactacgtcaatgacgcg
ccgacggtgagtgacgccgaatacgacgcgctgtttcgtgaattggaggcgttggagcag
gcgcatccgcagttttccagcgctgattcgccgacgcagcgggtgggcggtgcgccgctg
tcgcagtttgccaaagtgcgtcaccgcgtgccgatgctctcgctggccaatgcttttagc
gatgcggaggtgcgcgcgtttgaccagcggatgcaggatgaattgcgtagcgcgggtttg
ttggcagaggggcagcgtgtcgaatatgcgtgtgaggtgaaatttgacgggctggcgatc
aatttgcgctatgagcagggcgttttggtgcaggccgcgacgcgcggcgatggtgagact
ggcgaggatgtgaccgcgaatgtgcgcacgatacgctcgattcccctgcgcttgcaaggc
aaacagtttcccgaggtgttggaggtgcgcggcgaggtgttgatgaagcgctctgatttt
gagcgactgaatctgacgcaggcggataaaggtgagaagcagtttgccaatccgcgtaac
gcggcggcgggcagcctgcgtcaactcgattcgcgtatcaccgccagtcgcaaactctcg
tttttcgcctatggtttgggtgaaatgcaggacagcgtcgaggtgtttcagaccgatggt
tttgcgcacatcgtggcgcagttgcgcgatttaggctttccggtgttcacggcacaaccg
ctggtcagcggcgcagagggtttgttggatttttatgcgcagaccggcgcacggcgcaat
gagctgccgtttgacattgacggtgtggtgtataaggtcaatgacagcgcgcagcaagag
gcgctgggctttgtgtcgcgttcgccgcgctgggcgattgcccataaatttcccgcgcag
gaaatgaccaccgtggtgcaggatatcacggtgcaggtcgggcgtaccggcgcgatcacg
cccgtggcgcgactgttgccggtcgaggtcggcggcgtgattgtgaccaatgcgacattg
cacaatgccgatgaagtcgcgcgcaaagatgtgcgcatcggtgacacagtcgtggtgcgg
cgcgcgggcgatgtgattcctgaagtggtcatgagtatcatcgaaaagcgtccgctggat
gcgcgtgtcttcatcatgccgacgcaatgtcccgaatgcgcttcgccgatcgtgcgcgaa
gcaggtgaggcggtggcgcgttgcaccggcggcttgatttgcccggcgcagctcaagcag
agcctgatgcattttgcctcgcgcaaggcggtgaatattgacggcttgggcgataaattg
attgagcaattggtggatgtgggcttggtcaaaacaccggatgatctgtatcggttaacg
gttgagcaactggcgcaattggatcgcatggcgcaaaaatccgcgcaaaacgtgttcgat
gcgattcaaacctcgaaagaaaccacgctggcgcgctttgtctacgcgttgggtattcgt
catgtgggcgaggccaccgccaaatcgctggcgcagcattttcgcacgctggcggcgatt
cgtgcggcccatgcagaggaattgctcatggtggcggacatcgggccggtggtggcacaa
gcgatcgtcgatttttgggcggatgcgcgtcatcaaagcgtcaccgaacgtctgttacaa
ttgggggtgcactgggacgaattgcctgagcaggcggcgtctgacagtgcgtttgccgga
aaaaccgtggtattgaccggtactttgccgacgctcgcgcgtgatgcggccaaagcgttg
ctcgaaacagcgggggcaaaagtggcgggcagcgtttcggctaaaacggattatgtggtg
gcgggcgaatccgccggctcgaaattggataaagccaatgctctgggcgtgcgtgtgatt
gacgaggcacagatgttggcattgctgaatcaggcaaattag
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