Pseudodesulfovibrio methanolicus: V8V93_00005
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Entry
V8V93_00005 CDS
T10565
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen00541
Biosynthesis of various nucleotide sugars
pmen01100
Metabolic pathways
pmen01250
Biosynthesis of nucleotide sugars
Module
pmen_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
Enzymes [BR:
pmen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
V8V93_00005 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pmen01005
]
Core region
V8V93_00005 (rfaD)
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NCBI-ProteinID:
WWX22597
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Position
complement(join(4160292..4161161,1..111))
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AA seq
326 aa
AA seq
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MYIVTGGAGFIGSAMVWKLNQMGIDDILVVDNLSTSEKWNNLVGLKYQDYLHRDQFLKFI
LEGEDPFETEAVVHMGACSSTTELDADFLMENNYRYTQYVCRFCMGHDARFINASSAATY
GNGEFGFDDDEDGIGRLRPLNMYGYSKQLFDLWAKEAGLLDQIVCLKFFNVFGPNEYHKD
DMKSVICKAHAQILETGKLKLFKSYREEYPHGGQKRDFVYIKDCVDIMAWFLENRDKGGI
FNVGTGTARTWNDLANAVFSAMNREPEIEYIPMPEVIRDKYQYFTQANMDKLKAAGCTVK
MTSLEDGAMDYVQNYLDKDDRYLRSR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtatatagtcaccggcggcgcgggtttcatcggcagcgccatggtctggaagctcaac
cagatgggcatcgacgacattctggtggtggacaacctgtccaccagcgagaagtggaac
aacctcgtggggctcaagtaccaggattacctgcaccgcgaccagttcctcaagttcatc
cttgagggcgaggacccgttcgagaccgaggcggtcgtgcacatgggggcctgctcctcg
accaccgagctcgacgcggacttcctcatggagaacaactaccgctacacgcaatacgtc
tgccggttctgcatgggtcacgacgctcggttcatcaacgcctcgtccgcggccacctac
ggcaacggcgagttcggcttcgacgacgacgaggacggcatcggccggctgcgccccctg
aacatgtacggctactccaagcagctcttcgacctgtgggccaaggaggccgggctcctc
gaccagatcgtctgcctcaagttcttcaacgtgttcgggcccaacgagtaccacaaggac
gacatgaagtcggtcatttgcaaggcccacgcccagatcctcgagaccggcaagcttaag
ctgttcaagtcctaccgcgaggaatacccccacggcgggcagaagcgcgacttcgtctac
atcaaggactgcgtggacatcatggcctggttcctggagaaccgcgacaagggcggcatc
ttcaacgtcggaacgggaactgcaagaacctggaatgatttggcgaatgcggtgttttcc
gccatgaaccgcgagccggagatcgaatacatcccgatgcctgaggtaatccgtgataag
tatcagtactttacccaggcgaacatggacaagctcaaggcggcgggctgcaccgtcaaa
atgacgagcctggaagatggggccatggattacgtccagaattatttggacaaggacgac
agatacctccggtcccggtag
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