KEGG   Pseudodesulfovibrio methanolicus: V8V93_00445
Entry
V8V93_00445       CDS       T10565                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pmen  Pseudodesulfovibrio methanolicus
Pathway
pmen03030  DNA replication
pmen03430  Mismatch repair
pmen03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V8V93_00445
   03430 Mismatch repair
    V8V93_00445
   03440 Homologous recombination
    V8V93_00445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmen03032]
    V8V93_00445
   03400 DNA repair and recombination proteins [BR:pmen03400]
    V8V93_00445
Enzymes [BR:pmen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V8V93_00445
DNA replication proteins [BR:pmen03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V8V93_00445
DNA repair and recombination proteins [BR:pmen03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V8V93_00445
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: WWX22681
LinkDB
Position
complement(81953..82489)
AA seq 178 aa
MPTLDDVRFVAIDFETADPKRDSACALGIVVVDRGEIVARDYRLIRPPRARFNPFCVRVH
GIHWSDVCDEPSFGDLWPELEGYFQGADFLVAHNAAFDKSVLHTCCRESGRIAPEQPFLC
TVQLARKTWELASNKLPSVCEHLGIELNHHNAASDAEACALIAVNGLRLNPGFMSKVL
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcccacattggacgacgtgcggtttgtggcgattgatttcgagacggcggatcccaag
cgggattcggcgtgcgctttgggcattgtggtggtggaccggggcgagatcgtggcccgg
gactaccgcctgatccgtccgcccagggcccggttcaatccgttttgcgtgcgcgtgcac
ggcatccactggtcggatgtgtgcgacgagccgagtttcggcgacctgtggcccgaactg
gagggctacttccagggcgcggatttcttggtggcgcacaacgcggccttcgacaagtcg
gtgctgcacacctgctgccgggaatcgggccgtatcgcgccggaacagccgttcctgtgc
accgtgcagttggcccgcaagacgtgggagctggcctcgaacaaattgccgagcgtgtgc
gagcacctgggcattgaattgaaccaccacaacgcggcctcggacgccgaggcgtgcgcg
ctcatcgcggtcaacgggctgcggctcaaccccggcttcatgagcaaggtgctgtga

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