Pseudodesulfovibrio methanolicus: V8V93_01020
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Entry
V8V93_01020 CDS
T10565
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmen Pseudodesulfovibrio methanolicus
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmen03009
]
V8V93_01020 (rimO)
Enzymes [BR:
pmen01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V8V93_01020 (rimO)
Ribosome biogenesis [BR:
pmen03009
]
Prokaryotic type
ribosomal protein modification factors
V8V93_01020 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WWX22790
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Position
206245..207573
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AA seq
442 aa
AA seq
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MAKPATTLVRTYTVSLGCPKNRVDTERLLGALGSNMVPADAVADADLVLVNTCGFIQPAI
EESIGTILDVVREASEVAEGLGRKPLVCVAGCLVSRYGQDLKNGLPEVDLWLNTEEIELW
PAMAAEALALNLPGDTPRNLSTGPAYAFLKVSEGCSHNCRFCTIPSIRGPHKSWPVDFLL
DEARLLAGQVPEIIVVGQDSTAYGSDLGQGHDLPALIKGLAAIPNLEWLRIMYLYPAGLT
ESLLGLLRDTGAPFLPYFDIPLQHAHPDVLASMGRPFARDPDKVVDRVRSFFPDAALRTT
FIVGYPGETDEQFEALMDFVRRTRFHHLGVFPYWAEEGTPAAAMENQVPDEVKQERKDRL
MELQAEISAEILEGYVGETLPVVIERESDEWPGLYVGRAWFQAPEVDGVTYVGAPPDTRL
ELGDILDVEIEKADTYDLSGLV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccggcaaccacactcgtgcgaacatacaccgtcagcctggggtgtcccaaa
aaccgggtggacaccgaacggctgctcggcgcgctcggctcgaacatggtcccggcggac
gccgtggccgacgccgacctggtcctggtcaacacctgcggcttcatccagcccgccatc
gaggagtccatcggcaccatcctggacgtggtccgcgaggcctcggaagtggccgagggc
ctgggccgcaagccgctcgtctgcgtggccgggtgcctggtctcgcgctacggccaggac
ctcaagaacgggctgcccgaggtggacctgtggctgaacaccgaggagatcgagctgtgg
cccgccatggccgccgaagccctggccctgaacctgcccggcgacacaccgcgcaacctt
tccaccggcccggcgtacgcctttctcaaggtctcggaggggtgctcacacaactgccgg
ttctgcaccatcccgtccattcgcggcccgcacaagagctggccggtggatttcctcctg
gacgaggcccggctgctggctggccaggtacccgagatcatcgtggtcggccaggactcc
acggcctacggctcggacctcggccagggtcacgacctgcccgccctgatcaaggggctg
gccgccatcccgaacctggagtggctgcgcatcatgtatctctacccggccgggctgacc
gagtccctgctcggcctgctgcgcgacacgggcgcgccgttcctgccctatttcgacatc
ccgttgcagcacgcccacccggacgtgctcgcgtccatgggccgcccgttcgcccgcgat
ccggacaaggtcgtggaccgggtccggtccttcttcccggacgcggccctgcggaccacc
ttcatcgtcggctatcccggcgagacggacgaacaattcgaagccctcatggacttcgtg
cgccgcacccggttccaccacctcggggtcttcccctactgggccgaggagggcaccccg
gccgcggccatggaaaaccaggtcccggacgaggtcaaacaggagcgcaaagaccggctc
atggagctccaggccgagatcagcgccgagattctggaaggatatgtcggcgagaccctg
cccgtggtcatcgagcgggagtcggacgagtggcccggcctgtacgtgggccgcgcctgg
ttccaggccccggaggtggatggggtgacctatgtaggcgcgccgcccgacacccggttg
gagttgggcgacatcctcgatgtggagattgagaaggcggacacgtacgacctttcaggt
cttgtgtag
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