Pseudodesulfovibrio methanolicus: V8V93_04285
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Entry
V8V93_04285 CDS
T10565
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V8V93_04285 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmen03019
]
V8V93_04285 (recQ)
03400 DNA repair and recombination proteins [BR:
pmen03400
]
V8V93_04285 (recQ)
Enzymes [BR:
pmen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V8V93_04285 (recQ)
Messenger RNA biogenesis [BR:
pmen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V8V93_04285 (recQ)
DNA repair and recombination proteins [BR:
pmen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V8V93_04285 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WWX23426
LinkDB
All DBs
Position
complement(904917..907121)
Genome browser
AA seq
734 aa
AA seq
DB search
MTSPREILSTVFGFPEFIGLQEAIIDHVMQGGDSLVLMPTGGGKSLCYQIPAMLRPGVGV
CVSPLIALMQDQVQGLTQMGVRAACLNSALDPQTAYDIEQMAQNGRLDLLYVAPERLCRP
GFLDMLARCNPALFAIDEAHCVSQWGHDFRPEYTQLSIIRERFPDVPRLALTATADKPTQ
ADIVKNLQLENARVFATGFDRPNITYTVVPKKNPTRMLKRFIDENHPGDAGIVYRLSRKK
VEQTAEFLRKNGYNALPYHAGLSAAERFDNQERFMREEGVIMVATVAFGMGVDKPNVRFV
CHLEPPKSLEAYHQETGRAGRDGLPASAWMCYGMQDIAVLRSMIDSGEANETRKRIEHAK
LGSLFAFLETASCRRQALLAYFGEHIEPCGNCDNCLSPVETFDGSVIAQKALSNIFRTEQ
RFGVNHLAGVLTGANTDQIVRFNHDRVSTYGIGKDMTQDEWKSVYRQLLAAGLCSVDLER
FNALTLNERSWPVLKGEMPVRLRKDPALPKRGKKKQRRAPALAEDILTNWEAEALFERLR
DLRLSMAEAQSVPPYAIFADKTLLEFVRFRPRDMEEFACMSGVGASKLERFGETFLASLR
AHEEEHGRPDNIPEIPEAVREAKKREAEAKPDFTATAQSTLDLFLELGDVNGVAEARGLK
PSSIWRHLILAVNMGKIDYRRVAGLPDGELETIEAALRDFRGKGITAMTPVFEALGGAHP
YDLIRLVAAGLNRG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgacctccccgcgcgaaattctctccacggtcttcggctttcccgagttcatcgggttg
caggaggcgatcatcgaccatgtcatgcagggcggggactcgctggtgctcatgcccacg
ggcgggggcaaatccctgtgctaccagatcccggccatgctccggcccggcgtgggcgtc
tgcgtctcgccgctcatcgcgctcatgcaggaccaggtccaggggctgacccagatgggc
gtgcgtgccgcctgcctcaactccgccctggacccgcagaccgcctacgacatcgagcag
atggcccaaaacggccggctcgacctgctctacgtggccccggagcggctctgccggccc
ggcttcctggacatgctcgcccgctgcaacccggccctgttcgccatcgacgaggcccac
tgcgtgtcccaatggggccacgacttccggccggaatacacccaactgtcgatcatccgc
gaacgcttcccggacgtgccgcgcctggccctgaccgccacggcggacaagcccacccag
gcagacatcgtcaagaacctgcagttggagaacgcccgggtcttcgccaccgggttcgac
cggccgaacattacctatacagtggtgcccaagaagaatcccacgcgcatgctgaaaagg
ttcatcgacgagaaccacccgggagacgcgggcatcgtctaccgactcagccgcaagaag
gtcgagcagaccgccgaatttctccggaagaacgggtacaacgccctgccctaccacgcc
gggctgtccgcggccgagcggttcgacaaccaggaacggttcatgcgcgaggagggggtc
atcatggtcgccaccgtggccttcggcatgggcgtggacaagcccaacgtgcgcttcgtc
tgccacctggagccgcccaaatccctggaggcctaccaccaggagaccggacgcgccggg
cgcgacggcctgcccgcctcggcctggatgtgctacggcatgcaggacatcgccgtcctg
cgctccatgatcgactcgggagaggccaacgagacgcgcaagcgcatcgagcacgccaag
ctcggctcgctgttcgcctttctggagaccgcgtcctgccgccgccaggcgttgctggcc
tatttcggcgagcacatcgagccgtgcggcaactgcgacaactgcctgagcccggtggaa
acctttgacggctcggtcatcgcccagaaggcgctgtccaacatcttccgcaccgagcag
cgcttcggggtcaaccacctggccggggtcctgaccggcgcgaacaccgaccagatcgtc
cgcttcaaccacgaccgggtgtccacctacggcatcggcaaggacatgacccaggacgag
tggaaatcggtctaccgtcaacttttggccgccgggctgtgctcggtggacctggagcgg
ttcaacgccctgaccctgaacgagcgctcctggcccgtgctcaagggcgagatgccggtg
cggctgcgcaaggacccggccctgcccaagcggggcaaaaagaagcagcgccgcgccccg
gccctggccgaggacatcctgaccaattgggaggccgaggcgctgttcgagcgcctgcgc
gacctgcgcctgtccatggccgaggcccagtccgtgccgccgtatgccatcttcgcggac
aagaccctgctggaattcgtgcgcttccggccgcgcgacatggaggagttcgcctgcatg
agcggggtcggcgcgagcaagctggaacgcttcggcgagaccttcctggcgagcctcagg
gcccacgaggaggagcacgggcgccccgacaatatcccggagatcccggaagcggtgcgc
gaggccaagaaaagggaggccgaggccaagccggacttcacggccacggcccagtccacc
ctggacctgttcctcgaactcggcgacgtgaacggggtggccgaggcgcgcgggctcaag
ccctcgtccatctggcggcacctcatcctggccgtgaacatgggtaagatagactaccgc
cgcgtggccggactgcccgacggggaactggagaccatcgaggccgccctgcgcgacttc
cgcggcaagggcatcaccgccatgaccccggtcttcgaggcgctgggcggggcgcacccc
tacgacctgatccgcctggtggccgcggggctgaaccggggctag
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