KEGG   Pseudodesulfovibrio methanolicus: V8V93_04565
Entry
V8V93_04565       CDS       T10565                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pmen  Pseudodesulfovibrio methanolicus
Pathway
pmen00300  Lysine biosynthesis
pmen00470  D-Amino acid metabolism
pmen01100  Metabolic pathways
pmen01110  Biosynthesis of secondary metabolites
pmen01120  Microbial metabolism in diverse environments
pmen01230  Biosynthesis of amino acids
Module
pmen_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmen00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    V8V93_04565 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V8V93_04565 (dapF)
Enzymes [BR:pmen01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     V8V93_04565 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase
Other DBs
NCBI-ProteinID: WWX23482
UniProt: A0ABZ2IXX4
LinkDB
Position
complement(964757..965608)
AA seq 283 aa
MNIFTDSVSFFKMQGCGNDFVVIDNRELGVPETAMADWAKAVCARAFGVCADGLFFLENA
DDPALAYRWHFYNSDGSRAEMCGNASRCAAKLSHAIGLAPAEHAFGTDAGPIRAKVLLDG
PDEGRVKVQLTPPLKTETDIALDIDGRPLTVHFTDTGVPHTVVFVDDVTKIDIMDLGPKI
RYHAHFAPAGTNVNFAQVIDENTMLLRTYERGVEAETYACGTGAAATQLLAHTLGLTNDH
ADLTTTGNEVLTVFLENDTVYLQGAAELTFQGELYLKPLGLSL
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaacatattcaccgactccgtgtccttcttcaagatgcagggctgcggcaacgacttc
gtggtcatcgacaaccgtgaactcggcgtccccgagaccgccatggccgactgggccaag
gccgtgtgcgcccgcgccttcggcgtctgtgccgacggcctgttcttcctcgagaacgcc
gacgacccggcgctggcctaccgctggcacttctacaactccgacggctccagggccgag
atgtgcggcaacgcctcgcgctgcgccgccaagctctcccacgccatcggcctggccccg
gccgaacacgccttcggcaccgacgccgggcccatccgggccaaggtcctcctggacggc
ccggacgaaggccgcgtcaaggtccagctcaccccgccgctcaagaccgagaccgacatc
gccctggatatcgacggccggcccctgaccgtgcacttcaccgacaccggcgtgccccac
accgtggtcttcgtggacgacgtcaccaagatcgacatcatggacctcggccccaagatc
cgctaccacgcccacttcgcgcccgccgggaccaacgtcaacttcgcccaggtcatcgac
gaaaacaccatgctcctgcgcacctatgaacgcggcgtggaagccgagacctatgcctgc
ggcaccggcgccgccgccacccagctcctggcccacaccctcggcctgaccaatgaccac
gccgacctgaccaccaccggcaacgaggtcctgaccgtgttcctcgaaaacgacaccgtc
tacctccagggcgccgccgaactgaccttccagggcgaactctacctcaagcccctgggc
ctgagcctgtag

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