Pseudodesulfovibrio methanolicus: V8V93_07110
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Entry
V8V93_07110 CDS
T10565
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pmen Pseudodesulfovibrio methanolicus
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmen03000
]
V8V93_07110
Transcription factors [BR:
pmen03000
]
Prokaryotic type
Helix-turn-helix
Other families
V8V93_07110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA
PAS_4
Mg_chelatase
MCM
HTH_30
AAA_19
AAA_2
TIP49
TsaE
PAS
AAA_22
PAS_8
PAS_9
HTH_50
AAA_3
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WWX23973
UniProt:
A0ABZ2J5B8
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All DBs
Position
complement(1539843..1541909)
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AA seq
688 aa
AA seq
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MHLLLRDGNGFEIRRDPQPDGHAALPISRVREQRDVKVNYSSWKQFVEGKRLKTKNVDPA
LLASWQRCKDMAVDPAPRSCWDFLPMNQLEQFTTTLEKICGEIESTAYEVIKGKGLLISI
ANADARVARTCGDLDVLHEADRLNFGPGANWAESCVGTNAIGTALATGRPMQVFASEHYC
ESHHSWNCTAAPILDPRGNVWGCFDISGPTYSDHSGAMDVVLHAARALEQNLSRLYCSEL
EGQMASLFSSMFNSVMTGVLFLNKSGRITSANNTAEMLLSKSGGALRGRKAEELFDMGPY
LAQAKNASLCEPVIVKCLINPNLYIRVMPTFSASGAWLDTIVTVSETQRSRRFAAGSRPS
ARKQPEQEEVKGFEHVLHASQAMRKVIRQAANAARTPSTILLTGESGTGKELFARGIHQA
GPRAKSPFVAVNCGAFSEELVQSELFGYREGAFTGAVKRGRVGKFQKADKGVLFLDEISE
MPMSQQVNLLRALEERAVVPVGGTSPLPVDVKILAATNKNLRELVDQGRFREDLYYRLNV
VTIAIPPLRERGNDVSLLAEYHLKRLCTSFGIDCPEIDAETRDLLKAHEWPGNVRELINC
LEYAANNLSGDLLLPEHLPHYLLERTSGQIVGAASHSRDKGFLLKQREANAIREALDFHE
GNISKTAKALGIGRNTLYAKMDRYNIQA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgctcctcagagatggaaatggatttgaaatacgacgggatccgcagcctgat
gggcacgcggcgctccccatatcgcgcgtccgcgaacagcgggacgtcaaagtcaactat
tcgagctggaagcaattcgtcgagggtaagcggctgaagaccaaaaacgtggacccggcc
ctgcttgcctcctggcagcgttgcaaggacatggccgtggacccggccccacgcagttgc
tgggatttcctgcccatgaaccagttggaacagtttaccacaaccctggaaaagatctgc
ggcgagatcgaatcaacggcctacgaggtcatcaagggcaagggcctgctgatctccatc
gccaacgccgacgcccgcgtggcccgcacctgcggcgacctggacgtcctgcacgaggcg
gatcgtctgaacttcggcccgggcgccaactgggcggaatcctgcgtgggcaccaacgcc
atcggcactgccctggccacgggccgccccatgcaggtcttcgcctcggaacactactgc
gagtcccaccatagctggaactgcaccgcggcgcccatcctggacccgcgcggcaatgtc
tggggctgcttcgacatctccgggcccacctattccgatcactcgggggccatggacgtg
gtcctgcacgccgcgcgcgccctggagcaaaacctgagccgcctctattgttccgagctg
gaaggccagatggcctccctgttctcctccatgttcaactcggtcatgaccggcgtgctg
ttcctgaacaagtcgggccggatcaccagcgccaacaataccgccgagatgctgctcagc
aaatccggcggggcgctgcgcgggcgcaaggccgaggaactcttcgacatgggcccctac
ctggcccaggccaagaacgcctccctgtgcgagccggtcatcgtcaagtgcctgatcaac
ccgaacctgtacatccgggtcatgccgaccttcagcgccagcggcgcgtggctcgacacc
atcgtcacggtcagcgagacccagcgctcccgccggttcgcggcaggctcgcggccctcg
gcccgcaaacagcccgaacaggaagaggtcaagggattcgagcacgtgctgcacgcgagc
caggccatgcgcaaggtcatccgccaggcggccaacgccgcccggaccccgtccaccatc
ctgctgaccggcgagtccggcaccggcaaggaactcttcgcccgcggcatccaccaggcc
ggtcccagggccaaatccccgttcgtggccgtgaactgcggcgcgttctccgaggaactg
gtccagagcgagttgttcggctaccgcgagggggccttcaccggcgcggtcaagcgcggc
cgggtgggcaaattccagaaggcggacaagggtgtcctcttcctggacgagatctccgag
atgcccatgtcccagcaggtcaacctgctccgggcgctggaggagcgggccgtggtcccg
gtgggcggcaccagccccctgcccgtggacgtgaagatcctggcggccaccaacaagaac
ctgcgcgagctggtggaccaggggcgcttccgcgaggacctctactaccgcctgaacgtg
gtgaccatcgccatcccgccgcttcgggagcgcggcaacgacgtctccctgctggccgaa
taccacctcaagcggctgtgcacctcgttcggcatcgactgcccggagatcgacgcggag
accagggacctgctcaaggcccacgaatggcccggcaacgtccgcgagctgatcaactgc
ctggaatacgcggccaacaacctgtccggtgacctgctcctgccggagcacctgccccac
tatctcctggagcggaccagcggccaaatcgtgggcgcggcgagccactcccgcgacaag
gggttcctgctcaagcagcgcgaggccaacgccatccgcgaagccctggacttccatgag
ggcaacatcagcaagacggccaaggcgctcggcatcgggcgcaacaccctgtacgccaag
atggaccgttacaacatccaggcctga
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