Pseudodesulfovibrio methanolicus: V8V93_09905
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Entry
V8V93_09905 CDS
T10565
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen00521
Streptomycin biosynthesis
pmen00523
Polyketide sugar unit biosynthesis
pmen00541
Biosynthesis of various nucleotide sugars
pmen01100
Metabolic pathways
pmen01110
Biosynthesis of secondary metabolites
pmen01250
Biosynthesis of nucleotide sugars
Module
pmen_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
V8V93_09905 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
V8V93_09905 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
V8V93_09905 (rfbC)
Enzymes [BR:
pmen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
V8V93_09905 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WWX20770
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Position
2090488..2091057
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AA seq
189 aa
AA seq
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MQVHETEFPGLLVLVPKVFQDERGFFLESYNADHFREIGIDCGFVQDNHAYSKDVGVLRG
FHFQVPPAAQAKLVWVTRGAVLDVVVDLRRGSPTYGRVEHVILSAANFKRIFIPKGFGHA
YVTIMPDTEFQYKVDAPYSPGHESGLAWDDPAIGMDWEPALRGREPILSEKDRRLPGLAS
FESPFTFED
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccatgagacggaatttcccggtctgctcgtcctggttcccaaggtatttcag
gatgagcggggcttttttctggaaagctacaacgccgatcacttccgggagatcggcata
gactgcgggttcgtccaggacaatcacgcctactccaaggacgtcggcgtgttgcgcggt
ttccatttccaggtgccgcccgcggctcaggccaagctggtctgggtgacgcggggcgcg
gtcctggacgtggtcgtggacctgcgacgggggtctcccacctatggccgggtggagcac
gtgatcctgagcgccgccaacttcaagcgcattttcattcccaaggggttcggccacgcc
tatgtgaccatcatgccggacacggagttccagtacaaggtggacgcgccgtattcgccg
gggcacgaaagcggcctggcctgggacgacccggccatcggcatggactgggaaccggcc
ctccggggcagggagcccattctctctgaaaaggaccggcgtctgcccggactggcctct
ttcgaatctccctttaccttcgaggattga
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