Pseudodesulfovibrio methanolicus: V8V93_10030
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Entry
V8V93_10030 CDS
T10565
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen03030
DNA replication
pmen03430
Mismatch repair
pmen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V8V93_10030 (ssb)
03430 Mismatch repair
V8V93_10030 (ssb)
03440 Homologous recombination
V8V93_10030 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmen03032
]
V8V93_10030 (ssb)
03400 DNA repair and recombination proteins [BR:
pmen03400
]
V8V93_10030 (ssb)
03029 Mitochondrial biogenesis [BR:
pmen03029
]
V8V93_10030 (ssb)
DNA replication proteins [BR:
pmen03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V8V93_10030 (ssb)
DNA repair and recombination proteins [BR:
pmen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
V8V93_10030 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
V8V93_10030 (ssb)
Mitochondrial biogenesis [BR:
pmen03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
V8V93_10030 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
DUF3127
AfAlkA-like_TBP-like
Thiol_cytolys_C
Motif
Other DBs
NCBI-ProteinID:
WWX20795
UniProt:
A0ABZ2IPZ8
LinkDB
All DBs
Position
2114930..2115469
Genome browser
AA seq
179 aa
AA seq
DB search
MAGSLNKVIIVGRVGQDPKVSYTGSGQAVANFSVATDEGYRDRQTGQRVERTEWHRVVAW
RQQAEFVGNYIGKGRLVMVEGKLQTRKWQGQDGQDRYTTEIVADSIQGLDRAPDGQQPAQ
QGGYQQQGGYQQQGGYQQNRPQQNRPQQNGYPQNQPQQEEEDLGPAFPSEASGMDDVPF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagtttgaataaagtgatcattgtgggccgagtcggccaggatccgaaggtt
tcctataccggctccggccaggccgtggcgaacttttccgtggctacggacgaagggtac
cgcgaccggcagaccggccagcgcgtggagcgcaccgaatggcaccgcgtggtggcctgg
cgtcaacaggccgagttcgtgggcaactacatcggcaagggccgcctggtcatggtcgaa
ggcaagctccagacccgcaagtggcagggccaggacggccaggatcgctacaccacggag
atcgtggccgacagcatccagggactggaccgcgcccccgacggccagcagcccgcccag
cagggcggctaccagcagcagggcgggtaccaacaacagggcggctatcagcagaaccgt
ccgcagcagaaccgtccgcagcaaaacggctatccgcagaatcagccccagcaggaggaa
gaggacctcggtcccgccttcccgtccgaggccagcggcatggacgacgtgccgttctga
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integrated database retrieval system
