Pseudodesulfovibrio methanolicus: V8V93_12970
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Entry
V8V93_12970 CDS
T10565
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pmen Pseudodesulfovibrio methanolicus
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pmen03029
]
V8V93_12970 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmen02000
]
V8V93_12970 (bamA)
Mitochondrial biogenesis [BR:
pmen03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
V8V93_12970 (bamA)
Transporters [BR:
pmen02000
]
Other transporters
Pores ion channels [TC:
1
]
V8V93_12970 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
ShlB
V_ATPase_I_N
Motif
Other DBs
NCBI-ProteinID:
WWX21357
LinkDB
All DBs
Position
complement(2718330..2721053)
Genome browser
AA seq
907 aa
AA seq
DB search
MLSNLARGLAMGMVAVFVLLAAATGHAAEKLNQDVSVAVLPFEVNAGDDLSYLKDSLPEL
LTDRLKEAGFKVVAPEEVGRVLTDKGYTQFDPDRAREIALLSGAQFSVYGSLNQIGENLT
IDARLVDAYAKGPGKKLSVTKKGLINLLPAVDALVDRMRMDLLRLDIVSEIDVEGTKVLD
KDVVLMRMTMQKGDMITPKSINTALKNVYDLGYFDDVRVRVEDVEDGKKVIFVVKEKPRI
QAIGVRGAKEIDSADILEAVSTKKGSVINPKVLSDDIRVIREMYRKEGYYKANVTQEIED
AGTGIARLTFVIDEGPQLYIEHVIIDGAKQLDPDDIKGVLALKERGWLSWIDDSGVLKEE
LLDRDAAAIMAYYQSKGFLTAKVGQPEVEIKDDGIDVIYKVWEGDRYKMGDTSFTGDLIE
DPSKLLQVTKIDELKTEGQYFDRLILREDISALTSYYNDYGYAYADVGVKLEDDPETKVV
NVVYNISKHQRVHIRRVLIEGNTVTRDNVILREMRLADGDQFSGEKLKRSSQRLTNLDFF
EKVDIAPVPTGNPEEMDLVVKVKDKATGKISGGVGYSTYDGVFFGGEISEKNLFGRGYNV
GFNGQIGGSSTEYVLHFTNPHINDTDLGFGSKLYSRTTDYAQYNISGNGGTVNFFYPIGE
YTKLQWDYNLEAYEITDVSDSASQDIKDDEGSHLASVVAGTVTRDTRDDFRDTTTGTRAK
LSILFGGGPLGGTDNFIKYIGEFEWWQPVLEQVVFHSKFWAGYLHKNFGGDDVPTAQRFD
LGGVYTVRGYSNYLITPTEGPDSDAAVGGVKAFYTNLELKRPISKELGIVALGFFDAGNS
WKEDERWFESVERGSVGKPSLGLYKSVGAGINWYSPIGPVGLIYAYALDDLADSKQHTFE
LIMGQQF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtaatctcgctcgcggtctggcgatggggatggtcgccgtcttcgtcctgctg
gccgctgcaacgggccatgccgccgaaaagctcaaccaggacgtttccgtcgccgtgctg
cccttcgaggtcaatgctggcgacgacctgagttatctcaaggacagcctgcccgagctg
ctgaccgaccggctgaaggaggccggattcaaggtcgtcgcgcccgaagaggttggccgg
gtgttgactgacaaagggtacacccaattcgacccggacagggcccgcgaaatcgccctg
ttgtcaggggcccaattttccgtctacggctccctgaaccagatcggggagaacctgacc
atcgatgcccgcctggtcgacgcctacgccaaggggccgggcaagaagctttccgttacc
aaaaaggggctgatcaacctgctgcccgccgtggacgccctggtggaccgcatgcgcatg
gacctcctgcgcctggacattgtttccgagatcgacgtggagggcaccaaggtcctggac
aaggacgtggttctcatgcgcatgaccatgcagaaaggcgacatgatcacccccaagtcc
atcaacaccgcgctgaagaacgtttacgacctcggttatttcgacgatgtccgcgtccgg
gttgaggacgtcgaggacggcaagaaggtcatcttcgtagtcaaggagaaaccgcgcatc
caagccatcggcgtgcgcggggccaaggagatcgactccgccgacatcctcgaagcggtg
tccaccaagaagggcagcgtcatcaaccccaaggtcctgtccgacgacatccgcgtcatc
cgggagatgtaccgcaaggaaggctactacaaggccaacgtcacccaggagatcgaggat
gcgggcaccggcatcgcccggctgaccttcgtcatcgacgaggggccgcagctctatatc
gagcacgtcatcatcgacggtgccaagcagctcgaccccgacgacatcaagggcgtcctg
gccctcaaggagcgcggctggctctcctggatcgacgactccggcgtgctcaaggaggaa
ctcctcgaccgcgacgccgccgccatcatggcctattaccagtccaagggctttttgacc
gccaaggtcggccagcccgaggttgagatcaaggacgacggtatcgacgtcatctacaag
gtatgggaaggcgaccgttacaagatgggtgacacctcctttaccggcgatctcatcgag
gacccgtccaagcttctccaggtgaccaagatcgacgaactcaagacggaaggccagtac
ttcgaccggctcatcctcagggaggatatctcggccctgacctcgtactacaatgattac
ggctacgcctacgccgacgtgggcgtgaagctcgaggacgaccccgagaccaaggtcgtc
aacgtggtctacaacatcagcaaacaccagcgggtgcacatccgcagggtgctcattgaa
ggcaacacggtcaccagggacaacgtcattctgcgcgagatgcgcctggccgacggcgat
caattcagcggcgaaaaactcaagcgctccagccaacggctgaccaacctcgacttcttc
gagaaggtggacatcgctccggtgcccacgggcaacccggaggagatggatctggtggtc
aaggtcaaggacaaggccaccggcaagatcagcggcggcgtgggctactccacctatgac
ggcgtattcttcggcggcgaaatctccgaaaagaacctgttcggccgcggctacaacgtg
ggcttcaacggccagatcggcgggtccagcaccgagtacgtcctccatttcaccaacccg
cacatcaacgacaccgatctcggcttcggcagcaaactctactcccggacaacggattat
gcgcagtacaacatctccggtaacggcggcacggtgaacttcttctatcccatcggggaa
tataccaagctccagtgggactacaacctggaggcatacgagatcaccgacgtctccgac
agcgcttcccaggacatcaaggacgacgaggggtcgcatctggcctccgtggtcgccggt
acggtcacgcgcgacacccgtgacgatttccgcgacaccaccacgggcacccgtgcgaag
ctgagcatcttgtttggcggcggccccctcggcggtaccgataatttcatcaaatacatc
ggtgagttcgaatggtggcagccggtgcttgaacaggtcgtcttccactccaagttctgg
gccggctacctgcacaagaatttcggcggcgacgatgtgcccaccgcacagcggttcgac
ctcggcggcgtgtacacggttcgcggctattccaattacctgatcacgccgaccgaaggg
ccggattccgatgccgccgtcggcggcgtcaaggccttctacacgaacctcgaacttaag
cgtccgatcagcaaggaactcggcatcgtggccttgggcttcttcgacgccggcaactcc
tggaaggaagacgagcggtggttcgagtccgtggagcgcggcagcgtgggcaagccctcg
ctcggcctctacaagagcgtcggcgccggcatcaactggtattcccccattggtcccgtg
ggcctgatctatgcttacgcactggatgatctggccgactcgaagcaacacaccttcgag
ttgatcatgggccagcaattttaa
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