Pseudodesulfovibrio methanolicus: V8V93_13145
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Entry
V8V93_13145 CDS
T10565
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V8V93_13145 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmen03021
]
V8V93_13145 (rpoZ)
03400 DNA repair and recombination proteins [BR:
pmen03400
]
V8V93_13145 (rpoZ)
Enzymes [BR:
pmen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V8V93_13145 (rpoZ)
Transcription machinery [BR:
pmen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V8V93_13145 (rpoZ)
DNA repair and recombination proteins [BR:
pmen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V8V93_13145 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1672
Motif
Other DBs
NCBI-ProteinID:
WWX21388
LinkDB
All DBs
Position
complement(2764033..2764260)
Genome browser
AA seq
75 aa
AA seq
DB search
MARITVEDCLAKVSNRFLITQMAIKRVKQYREGYEPLVDTKNKEVVNALREIAAGKVVPD
TSDDLHLHSSATEDA
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggatcaccgtagaagattgtctggcgaaagtgagcaatcgttttctcatcacc
cagatggccatcaagagggtcaagcagtaccgtgaagggtacgagcccctggtcgacacc
aagaacaaggaagtggtcaacgccctgcgcgagatcgcggccggcaaggtcgtccccgac
acctccgacgacctccaccttcattcttccgcaaccgaggatgcctaa
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