KEGG   Pseudodesulfovibrio methanolicus: V8V93_13250
Entry
V8V93_13250       CDS       T10565                                 
Name
(GenBank) YcaO-like family protein
  KO
K09136  ribosomal protein S12 methylthiotransferase accessory factor
Organism
pmen  Pseudodesulfovibrio methanolicus
Brite
KEGG Orthology (KO) [BR:pmen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmen03009]
    V8V93_13250
Ribosome biogenesis [BR:pmen03009]
 Prokaryotic type
  ribosomal protein modification factors
   V8V93_13250
SSDB
Motif
Pfam: YcaO TPR_2 TPR_16 TPR_1 TPR_12 TPR_9 TPR_19 TPR_8 TPR_7 TPR_11 ANAPC3 TPR_14 ARM_TT21_C RMD1-3 Coatomer_E ARM_TT21_N TPR_CcmH_CycH PknG_TPR CFAP70_TPR_C TPR_10 CFAP70_mid_TPR ARM_TT21_2nd
Other DBs
NCBI-ProteinID: WWX21409
UniProt: A0ABZ2IVF0
LinkDB
Position
complement(2782490..2784217)
AA seq 575 aa
MIELKNCPKSFTTDQDKACTPVETVRRVKAALAEKCKGVLAQTDRVDTGRLGIPVFVSEC
GPEAREVMPTRKQMGKGASPEQAEASALMELVERFSYFSFWAAPGNFTELTWSEAQEKWP
GQVMDIGQVIRSVGEEIAPDKAVRLMDLIRWKFHPALNVRTGQTEYVPLDWFKKLNEFNG
SSAGNTFEESIAQGACELVERHVCAVIDRTRQTTPTIDPASCGDPVLRRLLDCFERNGVT
IVLKDFSLGYPVPTVAAVAWDRKTFPGLSEIVFTAGTAASPVKAAIRAVTEVAQLAGDFE
TSRVYEASGLPKFTELDQIEWLKQGEVVSLDSLPSVEDGDIYNELMALAEGLSEKGDTLY
AVDTRHPELMVTANYNFVPGFDFRERTPHRSIGLFTGRILAEDADFDEALEGLDVLEEIY
PGAYFLPFFRGLLALRMGDPLYAAARFEESVDLQPADAERGLAVFYQAYALSQIEEWEDA
LELLDRAVELDGECREFFNLRGVAHFKAERYAEAAENFQASLDIDSGSPHDLANLGLCHK
FMGNRQEAEDYLQAALDMDTTLDYAREHLRELVES
NT seq 1728 nt   +upstreamnt  +downstreamnt
gtgatcgaactcaagaactgtccaaaatccttcactacggaccaggacaaggcgtgtacc
ccggtggagaccgtccgccgggtcaaggccgccctggccgagaagtgcaagggcgttctg
gcccaaaccgaccgggtggacaccggcaggctcggcatccccgtattcgtcagcgagtgc
ggccccgaggcccgcgaggtcatgcccacgcgcaagcagatgggcaagggcgcgtccccg
gaacaggccgaggcctcggccctgatggagctggtcgagcgtttttcctatttcagcttc
tgggccgccccgggcaactttacggaactgacctggtccgaggcgcaggaaaagtggccc
ggccaggtcatggacatcggccaggtgatccgttccgtgggcgaggagatcgccccggac
aaggcggtccggctcatggacctcatccgctggaagttccacccggcgctcaacgtgcgc
accgggcagaccgagtatgtgcccctggactggtttaagaagctcaacgaattcaatggg
tcttccgccggtaatacctttgaggagtccatcgcccagggggcgtgcgagttggtggag
cggcatgtctgcgcggtcatcgaccgcacccgccagaccaccccgaccatcgacccggcc
tcctgcggggacccggtcctgcgccgtctgctcgactgcttcgagcgcaatggcgtgacc
atcgtcctcaaggacttctcgctgggctaccccgtgccgacggtggcggcggtggcctgg
gaccgcaagacctttccgggcttgagcgagatcgtcttcaccgccggaaccgcggcctcg
ccggtcaaggcggccatccgcgccgtgaccgaggtggctcagctcgcgggcgacttcgag
accagccgggtgtacgaggcctcgggtctgcccaagtttaccgaactcgaccagatcgag
tggctgaagcagggcgaagtggtttccctcgactccctgccttcggtggaggacggggat
atatataatgaattaatggccctggccgaagggttgtccgaaaagggcgacaccctgtat
gcggtggacacccggcacccggagctgatggtcacggccaattacaacttcgtgcccggc
ttcgacttccgggagcgcaccccgcatcggtccatcggcctgttcacggggcgcatcctg
gccgaagatgcggacttcgacgaggccctggaggggctggacgtgcttgaggagatctat
cccggcgcgtattttctgccgttcttccgggggctgctggccctgcgcatgggcgatccg
ctctatgccgcggcccgtttcgaggagtccgtggacctgcagcccgccgacgccgaacgc
ggtctggcggtcttctaccaggcctacgccctgtcgcagatcgaggagtgggaggacgcg
ctggaactgctcgacagggccgtggagctcgacggcgagtgtcgggagttcttcaacctg
cgcggcgtggcccatttcaaagcggaacggtatgcagaggcggccgagaacttccaggcg
tccctggatatcgacagcggctccccccacgacctggccaacctcggcctgtgccacaag
ttcatgggcaaccgccaggaggccgaggattatctccaggccgccctcgacatggacacg
accttggattatgcgcgggaacacttgcgtgaacttgtggaatcctag

DBGET integrated database retrieval system