Pseudodesulfovibrio methanolicus: V8V93_13250
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Entry
V8V93_13250 CDS
T10565
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pmen Pseudodesulfovibrio methanolicus
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmen03009
]
V8V93_13250
Ribosome biogenesis [BR:
pmen03009
]
Prokaryotic type
ribosomal protein modification factors
V8V93_13250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_16
TPR_1
TPR_12
TPR_9
TPR_19
TPR_8
TPR_7
TPR_11
ANAPC3
TPR_14
ARM_TT21_C
RMD1-3
Coatomer_E
ARM_TT21_N
TPR_CcmH_CycH
PknG_TPR
CFAP70_TPR_C
TPR_10
CFAP70_mid_TPR
ARM_TT21_2nd
Motif
Other DBs
NCBI-ProteinID:
WWX21409
UniProt:
A0ABZ2IVF0
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Position
complement(2782490..2784217)
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AA seq
575 aa
AA seq
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MIELKNCPKSFTTDQDKACTPVETVRRVKAALAEKCKGVLAQTDRVDTGRLGIPVFVSEC
GPEAREVMPTRKQMGKGASPEQAEASALMELVERFSYFSFWAAPGNFTELTWSEAQEKWP
GQVMDIGQVIRSVGEEIAPDKAVRLMDLIRWKFHPALNVRTGQTEYVPLDWFKKLNEFNG
SSAGNTFEESIAQGACELVERHVCAVIDRTRQTTPTIDPASCGDPVLRRLLDCFERNGVT
IVLKDFSLGYPVPTVAAVAWDRKTFPGLSEIVFTAGTAASPVKAAIRAVTEVAQLAGDFE
TSRVYEASGLPKFTELDQIEWLKQGEVVSLDSLPSVEDGDIYNELMALAEGLSEKGDTLY
AVDTRHPELMVTANYNFVPGFDFRERTPHRSIGLFTGRILAEDADFDEALEGLDVLEEIY
PGAYFLPFFRGLLALRMGDPLYAAARFEESVDLQPADAERGLAVFYQAYALSQIEEWEDA
LELLDRAVELDGECREFFNLRGVAHFKAERYAEAAENFQASLDIDSGSPHDLANLGLCHK
FMGNRQEAEDYLQAALDMDTTLDYAREHLRELVES
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaactcaagaactgtccaaaatccttcactacggaccaggacaaggcgtgtacc
ccggtggagaccgtccgccgggtcaaggccgccctggccgagaagtgcaagggcgttctg
gcccaaaccgaccgggtggacaccggcaggctcggcatccccgtattcgtcagcgagtgc
ggccccgaggcccgcgaggtcatgcccacgcgcaagcagatgggcaagggcgcgtccccg
gaacaggccgaggcctcggccctgatggagctggtcgagcgtttttcctatttcagcttc
tgggccgccccgggcaactttacggaactgacctggtccgaggcgcaggaaaagtggccc
ggccaggtcatggacatcggccaggtgatccgttccgtgggcgaggagatcgccccggac
aaggcggtccggctcatggacctcatccgctggaagttccacccggcgctcaacgtgcgc
accgggcagaccgagtatgtgcccctggactggtttaagaagctcaacgaattcaatggg
tcttccgccggtaatacctttgaggagtccatcgcccagggggcgtgcgagttggtggag
cggcatgtctgcgcggtcatcgaccgcacccgccagaccaccccgaccatcgacccggcc
tcctgcggggacccggtcctgcgccgtctgctcgactgcttcgagcgcaatggcgtgacc
atcgtcctcaaggacttctcgctgggctaccccgtgccgacggtggcggcggtggcctgg
gaccgcaagacctttccgggcttgagcgagatcgtcttcaccgccggaaccgcggcctcg
ccggtcaaggcggccatccgcgccgtgaccgaggtggctcagctcgcgggcgacttcgag
accagccgggtgtacgaggcctcgggtctgcccaagtttaccgaactcgaccagatcgag
tggctgaagcagggcgaagtggtttccctcgactccctgccttcggtggaggacggggat
atatataatgaattaatggccctggccgaagggttgtccgaaaagggcgacaccctgtat
gcggtggacacccggcacccggagctgatggtcacggccaattacaacttcgtgcccggc
ttcgacttccgggagcgcaccccgcatcggtccatcggcctgttcacggggcgcatcctg
gccgaagatgcggacttcgacgaggccctggaggggctggacgtgcttgaggagatctat
cccggcgcgtattttctgccgttcttccgggggctgctggccctgcgcatgggcgatccg
ctctatgccgcggcccgtttcgaggagtccgtggacctgcagcccgccgacgccgaacgc
ggtctggcggtcttctaccaggcctacgccctgtcgcagatcgaggagtgggaggacgcg
ctggaactgctcgacagggccgtggagctcgacggcgagtgtcgggagttcttcaacctg
cgcggcgtggcccatttcaaagcggaacggtatgcagaggcggccgagaacttccaggcg
tccctggatatcgacagcggctccccccacgacctggccaacctcggcctgtgccacaag
ttcatgggcaaccgccaggaggccgaggattatctccaggccgccctcgacatggacacg
accttggattatgcgcgggaacacttgcgtgaacttgtggaatcctag
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