Pseudodesulfovibrio methanolicus: V8V93_15500
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Entry
V8V93_15500 CDS
T10565
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmen Pseudodesulfovibrio methanolicus
Brite
Enzymes [BR:
pmen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
V8V93_15500
Transfer RNA biogenesis [BR:
pmen03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
V8V93_15500
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NCBI-ProteinID:
WWX21837
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Position
3248721..3250775
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AA seq
684 aa
AA seq
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MAKTTPLGPTVRPGTVVEFMHGDQPQLAWVLEESSGKLRLLTINKREMKLPAARLLPWHG
PVLSADASRQDIQNILNERQEARGEIQAGLDVMELWELSQGEVESAPLNWFADLLWEEWD
EDRLAALGRAMLQAKTHFKFRPPVFEIWPAEKVEQKLRQQAEEKEREAITSAGQILLKDL
WDAHNQGRKPRLPDLDPELADGLERILKGKVGETLDETDRKIWTAISKGLPDVPHLALLL
AQAWGVLPAHHNYRLDEAEYAWDDAWSQSFSSEIKEIEKGFSNQAQTPEIEDAVSIDAST
TRDIDDAFRIEKHGTGYRLSIVLARPEAHWTFGSALDKAVLHRATSLYLPEGTSHMMPER
LGTGLYSLLAGEARPALVTDFFLAADGALEKVEPRTAWVRVKANTTYEDADRAIRERSDE
SLMLAHDLATHLLERRLASGACVIRKPEPVVTLTGSGAQTSVNIDLKTPSPLSELIISEF
MILANSGLALWARDNGVPLLHRTQDIALPQEAAGIFTEPAEILRSVKLLLPPTLETAPKR
HAALGVSAYAPITSPLRRYTDFINMAQVCAFLASGEPRLDRDELDQLITHLNMRIQAVGA
VQRFRPRYWKLVYLAKRRREFQPAVLVDEAGPMATLAMPHLQVNVRAPKKMLGDKLYPGQ
RFQINFSRIDPLTNEIRLGEALEE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaacaaccccgctcggccccacggtccgccccggaacggtggtggaattcatg
cacggcgaccagccgcagctcgcctgggtgcttgaggaatcgtccggcaagctccgcctg
ctgaccatcaacaagcgcgagatgaagctgcccgccgcccggctgctgccgtggcacggc
ccggtgctgtccgccgacgcctcgcgacaggacatccagaacatcctcaacgaacgccag
gaagcgcgcggcgaaatccaggccggactggacgtcatggaactttgggaactgtcccag
ggcgaggtggaatccgcgcccctgaactggttcgccgacctgctctgggaggagtgggac
gaggaccggctggccgcgctgggccgggccatgctccaggccaagacccacttcaagttc
cgcccgccggtcttcgaaatatggccggccgaaaaggtcgagcaaaagctccggcaacag
gccgaggaaaaggagcgggaggccatcaccagtgccggccagatcctgctcaaggacctc
tgggacgcccacaatcagggacgcaagccgcgcctgcccgatctggacccggaactggcc
gacgggctggagcgcattctcaagggcaaggtcggcgagaccctggacgaaaccgaccgc
aagatatggacggccatctccaaggggctgcccgacgttccgcacctggccctgctcctg
gcccaggcctggggggtgttgccggcccaccacaactaccgcctggatgaggccgaatac
gcctgggacgacgcatggtcccaatccttttccagtgaaataaaagagatagaaaagggc
ttttccaatcaggctcagacgccggagatcgaggatgcggtttccatagacgccagcacc
acccgggacatcgacgacgccttccgcatcgaaaaacacggcacggggtatcggctctcc
atcgtcctggcccggcccgaggcccactggaccttcggatcggccctggacaaggcggtc
ctgcaccgggccaccagcctgtacctgcccgagggcaccagccacatgatgcccgagcgg
ctcggcaccgggctgtactccctgcttgccggggaggcgcgcccggccctggtcacggac
tttttcctggcggccgacggcgccctggagaaggtcgaaccgcgcacggcctgggtccgg
gtcaaggccaacaccacctacgaggacgcggaccgggccatccgggagcggagcgacgaa
tccctgatgctggcccacgacctggccacccacctcctggaacggcggctggcctcgggc
gcctgcgtcatccgcaagcccgagcccgtcgtcaccctcaccgggagcggcgcgcagaca
tcggtcaacatagatctgaagacgcccagcccgctctcggagctgatcatcagcgaattc
atgatcctggccaactcgggtctggccctgtgggcgcgggacaacggcgtgcccctgctc
caccgcacccaggacatcgccctgccccaggaggccgccggcattttcaccgagcctgcc
gagatcctgcgctcggtcaaattgctcctgcccccgaccctggagaccgcgcccaagcgg
cacgcggccctgggcgtttcggcctacgcgcccatcacctcgccgcttcggcgctacacc
gatttcatcaacatggcccaggtctgcgccttcctggcatcgggcgagccgaggctcgac
cgcgatgagctggaccagctcatcacccacctgaacatgcgcatccaggcggtcggtgcg
gtgcagcggttccggccccggtactggaagctggtctatctcgccaagcggcggcgcgag
ttccagcccgccgtgctggtggacgaggccgggcccatggccaccctggccatgccccac
ctccaggtcaacgtgcgcgcccccaaaaaaatgctcggcgacaagctctatccgggccag
cgcttccagatcaacttctcgcgtatcgacccgctgaccaacgaaatacgcctcggcgaa
gccctggaagaataa
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