Pseudodesulfovibrio methanolicus: V8V93_17475
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Entry
V8V93_17475 CDS
T10565
Name
(GenBank) SpoIID/LytB domain-containing protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
pmen Pseudodesulfovibrio methanolicus
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmen01011
]
V8V93_17475
Enzymes [BR:
pmen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
V8V93_17475
Peptidoglycan biosynthesis and degradation proteins [BR:
pmen01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
V8V93_17475
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GFIT
Motif
Pfam:
SpoIID
TPR_6
TPR_19
TPR_12
Motif
Other DBs
NCBI-ProteinID:
WWX22224
LinkDB
All DBs
Position
complement(3727832..3729379)
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AA seq
515 aa
AA seq
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MKIRPSGIVFLILVALLCGPAPASARADAETERLARWQLNNADLLIDEGKYLEAVEYVDS
AYEISRYPKTKSDALLARAMVLATFLDAPLQAVKAYAQLAREFPEYAETAAYQTAFLYMQ
ADRPDQARQGFGEYLKRYPEGRFRFQAEAMLESLGEAGPLPEPRRATVARPVLRVLLARK
CGRIRLSGQGADLCADGIGCLPSMDFQVRNGVPLINGRRFAGGKVRVRSDKPIRFSVNGK
GKTVRGDLGVSCADGRFGLMNLVDIEAYLRSVVPAESYAGWPLATLRAQAVAARTYAYYQ
KLHRASRAYDVRADTCDQMYGGVEREAARTDRAVRETAGRVLTYAGKPILAQYTANSGGY
TADAAAVFGTPKPYLVAHADPASLKGKMAYWSRTYSAGEIVDALGRIGVDAAGLRSIEPE
VAGPSGRLVKVRLLHARGSTVLRTRTTLASSRVLVLPEVLMGIERQGDKYIFKGRGHGHG
VGYSQWGAAELGKSWDYGRILSFYYPGTAMKTNWN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccgtccgtccggaatagtttttctgatcctcgtcgcgctgctgtgcggtccc
gctccggcttcggcccgggcggatgccgagacggagcggctcgcccgttggcagttgaac
aacgcggacctgctcattgatgagggcaagtatctggaagcggtcgaatatgtggattcc
gcctacgagatcagccgttatcccaagacgaagagcgacgcgttgttggccagggccatg
gtgctggcgacgtttctggatgccccgctccaggccgtgaaggcctacgcgcagttggcc
cgcgagttccccgaatacgcggagacggccgcctaccagacggcgtttctgtacatgcag
gccgacaggccggaccaggccaggcagggattcggggaatacctcaagcggtatcccgaa
gggcggttccgcttccaggccgaggccatgctcgaaagcctcggggaggccgggccgctc
ccggaaccccggcgggcaaccgtggcccggcccgtgctccgggttctgctggcgcgcaag
tgcggccggatacgcctgtccggccagggcgccgatctctgcgcggacggcataggctgc
ctcccgtccatggatttccaggtccggaacggcgtgccgctgatcaacgggcggcgcttc
gccgggggcaaggttcgcgtccgttccgacaagcctatccggttcagcgtgaacggcaag
gggaagacggtccgcggcgatctcggggtgagctgtgcggacgggcgtttcggcctcatg
aatcttgtggacatcgaggcctatcttcgctccgtggtcccggccgaatcctatgcgggc
tggccgctggcgaccttgagggctcaggccgtggcggcccggacctatgcctattaccag
aaattgcaccgcgcgagccgggcgtacgacgtgcgcgctgacacctgtgatcagatgtac
ggcggcgtcgagcgcgaggcggcccggaccgaccgggccgtgcgcgagacggccgggcgg
gtcctgacctacgcgggcaagcccattctcgcccaatacacggccaacagcggcgggtac
accgctgacgccgcagcggtgttcggcacgcccaagccctatctggtggcccatgccgac
cccgccagcctcaaggggaaaatggcctactggagccggacctactcggccggggagatc
gtggacgcgctgggcaggatcggggtcgacgccgccgggctgcggtcgatcgagccggaa
gtggcgggcccgtccgggcggctggtgaaggtgcggctcctgcacgcacggggctcgacc
gtgctgcggaccaggacgaccctggccagctcccgcgtgctcgtgttgcccgaggtgctc
atgggcatcgagcggcagggggacaagtatatattcaagggcaggggacacgggcacggc
gtcggctattcgcaatggggcgccgccgagttgggcaagtcatgggactacggcaggatc
ctgagtttctactacccgggaacggccatgaaaacgaactggaactga
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