Pseudodesulfovibrio methanolicus: V8V93_17760
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Entry
V8V93_17760 CDS
T10565
Name
(GenBank) ATP-binding protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
V8V93_17760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmen03019
]
V8V93_17760
03009 Ribosome biogenesis [BR:
pmen03009
]
V8V93_17760
04131 Membrane trafficking [BR:
pmen04131
]
V8V93_17760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmen04147
]
V8V93_17760
Messenger RNA biogenesis [BR:
pmen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
V8V93_17760
Ribosome biogenesis [BR:
pmen03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
V8V93_17760
Membrane trafficking [BR:
pmen04131
]
SNARE
SNARE associated proteins
Others
V8V93_17760
Autophagy
Aggrephagy
Other aggrephagy associated proteins
V8V93_17760
Exosome [BR:
pmen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V8V93_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
nSTAND3
AAA_22
AAA_5
AAA_28
AAA_33
AAA_11
DO-GTPase1
AAA_19
DUF4032
IstB_IS21
AAA_18
RNA_helicase
AAA_24
TsaE
AAA_14
RuvB_N
Mg_chelatase
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
WWX22280
UniProt:
A0ABZ2IUB6
LinkDB
All DBs
Position
3799498..3800577
Genome browser
AA seq
359 aa
AA seq
DB search
MDIKTFESPAPEVCASKIFEACGAKFDKDVVTDLWQKIRRHQWVLSEKLNRDVGFKIACN
DFVDNIGTDKELATHNQEKLLVQMGAQAITRDIWDTISDTQPPKKLIQKKIILPLVEEEL
SRKHGVIPPKTIIFFGPPGTGKTHFVKAMAGRLAWWYVEIMPSMLMVDGVDKIGAHLRSV
MEKARDLEEVVIFIDEFEELAGNRDRANRVDRSITNEFLKQVPLIKSHTSKLLLVCATNY
IRQLDAALLRPGRFDCIIPVGTLDESGRETILKYFLSKMNVGAIDLARIIALTGKYTPAD
IEYLFQTIAQHAFEEECESGSNVPVTTDAIVQAIATFTPSLTEGVIEEFKEDIIKYSRA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaagacattcgaatcacccgcacccgaggtctgcgccagcaagatcttcgag
gcctgcggcgcgaagttcgataaggatgttgttaccgatctctggcaaaaaatcaggcga
catcagtgggtactgtccgaaaaattgaaccgggatgtcggattcaagatcgcctgcaac
gattttgtcgataatatcgggacggataaggaactcgccacgcacaaccaggaaaaactg
ctggtgcaaatgggcgcacaggccatcacccgagacatatgggacaccatctccgacacc
cagccacccaagaagctgatacaaaagaagatcattctccctctggttgaggaggaactc
tctcggaaacatggcgtcattccacccaaaaccatcattttcttcggccctcccggcacg
ggcaaaacccatttcgtcaaggccatggccggaaggctggcgtggtggtacgtggaaatc
atgccgagcatgctcatggtcgacggagtggacaaaatcggcgcccacctgcgcagtgtg
atggagaaggcgcgagacctggaagaagtcgtcatattcatagacgaattcgaagaactt
gcaggcaatcgggatagagccaatcgcgtagacaggtccatcaccaatgagtttctcaag
caggtcccgcttatcaaaagccataccagcaagttgctgctcgtctgcgcgaccaactac
atccgccaactggacgccgccctgctgcggcctgggcgatttgattgcatcatcccggtc
gggactctcgacgagagcggaagagaaaccattctgaaatatttcttgtccaagatgaac
gtaggcgccatcgatttggcgcgtatcatcgccttgacgggaaaatacaccccggccgac
atcgaatacctctttcagaccatagcccagcacgcctttgaagaagaatgcgaaagcggg
agcaacgttccggtgacaacggacgccatcgtccaggccattgcaaccttcaccccctca
ctgacggagggcgtgatcgaggagttcaaagaagacatcatcaaatactcacgcgcttga
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