Pseudodesulfovibrio methanolicus: V8V93_18845
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Entry
V8V93_18845 CDS
T10565
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmen Pseudodesulfovibrio methanolicus
Pathway
pmen00260
Glycine, serine and threonine metabolism
pmen00460
Cyanoamino acid metabolism
pmen00630
Glyoxylate and dicarboxylate metabolism
pmen00670
One carbon pool by folate
pmen00680
Methane metabolism
pmen01100
Metabolic pathways
pmen01110
Biosynthesis of secondary metabolites
pmen01120
Microbial metabolism in diverse environments
pmen01200
Carbon metabolism
pmen01230
Biosynthesis of amino acids
pmen01240
Biosynthesis of cofactors
pmen04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pmen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V8V93_18845 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V8V93_18845 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V8V93_18845 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V8V93_18845 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V8V93_18845 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V8V93_18845 (glyA)
Enzymes [BR:
pmen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V8V93_18845 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WWX22483
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Position
complement(4028670..4029908)
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AA seq
412 aa
AA seq
DB search
MEELFIQDPAVAAAIADEIDRQVSKLELIASENFVSTAVRQAQGSVMTHKYAEGYPGKRW
YGGCEFVDEVEDLARDRAKELFGATYANVQPHSGSQANMAVYFAACEPGDTVLGMDLSHG
GHLTHGSPVNFSGKLFNMVHYGVDKETQTIDYDAVEALAKEHKPTMIIAGASAYPRIIDF
PRFRAIADEVGAKLMVDMAHIAGLIAAGEHPSCIEYAHYTTTTTHKTLRGPRGGMILSSE
DLGQELNSNIFPGIQGGPLMHVIAAKAVAFGEALSPGFVEYQQQVVKNAKQLAASLTEAG
YKLVSGGTDNHMMLLDLSEKDYTGKDAQIALDKAGITANKNTIPFETKSPFQTSGVRLGT
PALTTRGMIEEDMIVVAEAIVAALDNMSDDKTLANIAEEVEEFAREFPLFAW
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctgtttatccaggacccggctgtagccgccgccattgccgacgagatcgac
cgccaggtctccaagctggagctcatcgccagcgagaacttcgtgtccaccgccgtgcgc
caggcccagggctcggtcatgacccataaatacgccgaaggctatccgggcaaacgctgg
tacggcgggtgcgagttcgtggacgaggtcgaggacctggcccgcgaccgcgccaaggag
ttgttcggcgcgacgtatgccaacgtccagccgcactccggttcccaggccaacatggcc
gtgtacttcgcggcctgcgagcccggcgacaccgtgctcggcatggacctgtcccacggc
ggccacctgacccacggctccccggtcaacttctcgggcaagctcttcaacatggtgcac
tacggcgtggacaaggagacccagaccatcgactacgacgcggtcgaggccctggccaag
gagcacaagccgaccatgatcatcgcgggcgcgtccgcctatccgcgcattatcgacttt
ccccgtttccgtgccatcgccgacgaggtcggtgccaagctcatggtcgacatggcccac
atcgcgggcctgatcgcggcgggcgagcacccctcctgcatcgaatacgcccactacacc
acgaccacgacccacaagaccctgcgcggcccgcgcggcggcatgatcctgagctccgag
gatctgggccaggagctcaactccaatatcttccccggcatccagggcggcccgctgatg
cacgtcatcgcggccaaggccgtggccttcggcgaggccctgtcgcccggtttcgtggag
tatcagcagcaggtggtcaagaacgccaagcaactggccgcctccctgaccgaggcgggc
tacaagctggtctccggcggcaccgacaaccacatgatgctgctggatctgtctgaaaag
gactacaccggcaaggacgcccagatcgccctggacaaggcgggcatcacggccaacaag
aacaccatcccgttcgagaccaagtccccgttccagacctcgggtgtgcgcttgggcact
ccggccttgaccacccgcggcatgatcgaagaggacatgatcgtggtcgccgaagccatc
gtggccgcgctcgacaacatgagcgacgacaagaccctggccaacatcgccgaagaagtg
gaggagttcgcccgcgaattcccgctcttcgcctggtag
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