Paramacrobiotus metropolitanus: 129580811
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Entry
129580811 CDS
T09028
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03030
DNA replication
pmeo03420
Nucleotide excision repair
pmeo03430
Mismatch repair
pmeo03440
Homologous recombination
pmeo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129580811
03420 Nucleotide excision repair
129580811
03430 Mismatch repair
129580811
03440 Homologous recombination
129580811
03460 Fanconi anemia pathway
129580811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmeo03000
]
129580811
03032 DNA replication proteins [BR:
pmeo03032
]
129580811
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129580811
Transcription factors [BR:
pmeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129580811
DNA replication proteins [BR:
pmeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129580811
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129580811
MMR (mismatch excision repair)
129580811
DSBR (double strand breaks repair)
HR (homologous recombination)
129580811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
IBR
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-GeneID:
129580811
NCBI-ProteinID:
XP_055327466
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MAFATGEPELSEGCIRAILNSVDIKEPRVQLLEARNINQNRYRLLINDKRNTYSFAMLAT
QLNHLVDNNTLTPYSVIIMKKYVVNNQQNKNLIILLEVQVAVPGDQVGRKLGSPVSLGDN
GMPTGAPNANPSAHAGSPAVAPAALRPPVPQQGFPNRATFNSSSFQSPSKQPAQFPGGPV
AKRPNLGSPSMGNNSFGARNVPVAATYNSGGSFQAQQPTMPPTGSASLSQNDTQNIHPIS
ALNPYNSVWVIRAKVMSKDSIRFWNKPNSQGKVFSVLVTDGESEIKISGFNNEVDRFYDV
FEVGKTYYIKNGLVKNADPKFSRGRMYDLNLKPESIVEECLEDAGPVKIRYNFVPFYSLL
TISGDSNIDVIGVCSSAGELFQGKSRQSGRDFTKRDLDIVDDTSTSVRVTLWGSQAEKYD
KDVVLNKVLAIHGCRLAEFNGTRSLSTSFDAIVEVDPDIPEGHKLRGWYDSGGCNVATQA
LMGAGMSGNFGSGSTPFKCFWQIEAEGLGNGDKADFFMIRAVIMKAFARDNTLYRACINS
GCNKKVTDQGNGTFRCEKCNTENDSFVWRLMLTVEVSDCTGGAYATLFQENAEKVLQQDA
QALGEMKTQDATVFEKAINNCQFLAFMFKMKVKMENYNDEWRRKYTVITAEPLNFVAETK
RLSEALAHMGIA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgcgacgggcgaaccggagctgagtgaaggctgtattcgggcaattctcaac
agtgttgacatcaaggaacctcgagtgcagctactggaagcccgtaacatcaaccagaat
cgttatcgccttttgatcaacgacaaacggaatacgtactccttcgccatgttggccacc
caactgaatcacctcgtggacaacaacaccttgacaccatattctgtcatcattatgaag
aaatacgtcgtgaataaccagcaaaataagaaccttattatcctgttggaagtacaagtt
gccgttccaggcgatcaagttggcagaaaactcggctctcctgtttccttgggggacaat
gggatgccaactggagcacccaatgcaaaccctagcgctcatgcaggcagtccagctgtc
gcgccggctgcattacgtccccctgttccacaacagggattcccgaatcgagcaactttc
aacagctcttcattccaaagcccttcaaaacagcctgctcagtttccagggggaccagtt
gccaaacgtccaaatctgggctcgccatccatggggaataacagttttggtgcgcgaaac
gtcccagtggcggcaacgtataattcgggaggatctttccaagcacagcaaccgacaatg
ccaccaacgggatccgcatcgctctcgcaaaacgatacccagaatatccacccgatttcg
gcccttaatccctacaacagcgtctgggttatcagagctaaagtgatgagtaaagattcc
attcggttttggaacaagcccaattctcagggcaaagtgttcagtgttctggtaaccgac
ggggaaagcgaaataaaaatatctggattcaataatgaagtcgatcggttttacgacgtg
tttgaagtgggcaagacttattatatcaaaaatggattggttaaaaacgccgatccgaaa
ttcagccggggccgtatgtatgacctcaatcttaaaccggaaagtattgttgaagagtgt
ctggaggatgcgggacctgttaaaatccgctataacttcgtgccattttattctttgcta
acaatcagcggagattccaacatcgatgttatcggagtttgttcatcggctggagaactc
tttcaaggaaagagtcgccagagtggacgggattttacaaaacgcgatttggatatcgta
gatgacaccagtactagcgtgcgtgtcacattatgggggtctcaggcggaaaagtacgat
aaggacgtagtgctaaataaggtgttggccatacacggctgccggttggcggaattcaac
ggcactcggagcttgtctacctcgttcgacgctatagtggaagtggatcccgacattcca
gaaggccacaaactgcgtgggtggtacgatagcggtggctgcaatgtcgctacgcaagca
ctcatgggcgcaggaatgtccgggaatttcggatcaggatccacaccgttcaagtgcttc
tggcagatagaagccgaagggttgggtaacggggataaagcggattttttcatgatacgt
gctgttattatgaaggcatttgcacgtgacaacaccttgtaccgagcctgcatcaacagc
ggctgcaataagaaggttacggaccagggtaacgggacgttccgttgcgaaaagtgcaac
accgaaaacgatagttttgtctggcggttgatgttaacagttgaagtgtcggattgtact
ggtggtgcctatgctacgctgtttcaagaaaatgccgagaaagttctgcagcaggacgct
caagcactcggcgaaatgaaaacccaggacgccacggtgttcgaaaaggccattaataac
tgccagtttctagctttcatgttcaagatgaaggtgaaaatggaaaactacaacgacgaa
tggcggcgaaagtacaccgttatcacggctgagccattaaactttgtagccgaaacaaaa
cggctaagcgaagcgctggcccatatgggaatcgcatga
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integrated database retrieval system
