Paramacrobiotus metropolitanus: 129581177
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Entry
129581177 CDS
T09028
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pmeo
Paramacrobiotus metropolitanus
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmeo03009
]
129581177
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129581177
Ribosome biogenesis [BR:
pmeo03009
]
Eukaryotic type
90S particles
Helicases
129581177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Bin2_C
Motif
Other DBs
NCBI-GeneID:
129581177
NCBI-ProteinID:
XP_055328078
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MNSNKYFRALTVGAHTSRKTAISTTSSAEAAQKSRPVSTGAKKRTHQQKSLDETLTDRAK
REAESDSEDDQDDTTPSGNGMDASSSEEEEPGLRVYSGADVHEKGAPHRKRRNKLLRKSG
ARVEQIRQEEINRKRKQNNIHVLGADVCEPIASFAELKLRYNITDQLLENIANVGYAVPT
PVQMQAVPILLERREVLASAPTGSGKTAAFAIPILHALGKHKTVGYRAVVVSPTRELAKQ
TFFEFQRLGAGMGYHIQFISNTIKLEKLLRKKPSIAKKMDILITTPNKLVHLLQDTEGKS
PVISLENVEWLVIDESDKLFEAEKEGGFRDQLGVIYKACSSPRICRTLFSATFAVEVEEW
CKLNLNNVIMLSIGARNAATEAVEQKLLFVGSTGAKVTALRQLLKENFTPPILIFVQTKQ
AAKELYREIGHEGFHADVIHSDRDQQERDRVVDSFRSGKLWTLIATDVLGRGVDFKGVNL
VINYDFPRTSISYIHRIGRAGRAGTKGKAITLYTEKDYVLLRSVAKVIKRSGGEIPDFML
QLPKATKSEKERLQFRWNRRKTHTGKRKRPQKMPTKSS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaattccaacaagtactttcgagcgctgacggtcggagcccatacttccagaaagact
gcaatctcgacgacatcttccgcggaagctgcacaaaaaagcagaccggtcagcacggga
gcgaaaaagagaacgcatcagcaaaagtcgcttgacgaaactttgacagatcgcgcgaaa
cgagaagcagagtcggatagcgaagatgatcaagacgacaccacaccgagtggaaatggc
atggatgcgtcaagtagtgaagaagaggaaccgggccttcgtgtttattccggcgctgat
gtacatgaaaaaggagctccccatcgcaaacgacgaaataaattactgcgaaaatcgggc
gctcgcgttgaacaaatccgacaggaagagattaatagaaagcgaaagcaaaacaacatc
catgttctcggtgcggatgtttgcgaacccatagcgtcgttcgctgagctgaaattgcgc
tacaacatcaccgatcagctgctggagaatatcgcgaatgttggctatgccgttcctaca
ccggtgcaaatgcaagctgtccctattttactcgagagaagagaagttttagcttctgcg
cccaccggttcgggcaaaactgcagctttcgcaattccgattctacacgccctgggaaag
cataaaaccgtcggctaccgagcggttgttgtttctccaacaagagagcttgcaaaacag
actttctttgaatttcaaagactcggagccggtatgggctaccacattcagttcatcagt
aacacgataaagctggagaaattactcagaaagaaaccaagtatagcaaaaaaaatggac
attctcattaccactcctaataaactagtgcatttactacaagacacggaaggaaaatct
cctgttatcagcctggagaatgtagaatggctggtgattgatgaatcggacaaattgttc
gaagcggaaaaagaaggtggatttcgcgatcagcttggggttatctacaaggcgtgcagc
agtcctcgcatttgccggaccttgtttagtgctacatttgctgtagaagtggaggaatgg
tgtaaactaaatctaaataatgtgatcatgctttctattggagcgcgaaacgctgcaacg
gaagctgttgagcagaagttgctgtttgtcggcagcactggtgctaaagtaacagcgcta
cgtcagttgctgaaagagaactttactccaccaattctgatcttcgtacaaactaaacaa
gctgccaaagagttgtaccgcgagataggtcatgaaggttttcatgccgacgtcatacat
tcggatcgcgatcaacaggaacgggaccgagtggttgacagtttccgttccggaaaactc
tggacccttatcgccaccgacgtgcttggccgaggtgtggatttcaaaggagttaatctc
gttattaattatgattttcccagaacgtccataagctacatacaccggattgggcgtgcc
ggccgcgctggaaccaaaggcaaagccattacactttacacagaaaaagattacgttctt
cttcgaagtgttgccaaagtgatcaaacgatcgggtggagaaattcctgatttcatgctg
caacttccaaaagctacgaagtcagaaaaagagcgcttgcagttccgctggaatcggcgc
aaaacgcacaccgggaagcgaaagcgaccgcagaaaatgccgacgaagagttcttaa
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