KEGG   Paramacrobiotus metropolitanus: 129581443
Entry
129581443         CDS       T09028                                 
Name
(RefSeq) histone deacetylase 1-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pmeo  Paramacrobiotus metropolitanus
Pathway
pmeo03082  ATP-dependent chromatin remodeling
pmeo03083  Polycomb repressive complex
pmeo04330  Notch signaling pathway
pmeo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:pmeo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129581443
   03083 Polycomb repressive complex
    129581443
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    129581443
   04350 TGF-beta signaling pathway
    129581443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmeo03036]
    129581443
Enzymes [BR:pmeo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     129581443
Chromosome and associated proteins [BR:pmeo03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     129581443
   HDAC complexes
    Sin3A-HDAC complex
     129581443
    BRAF-HDAC complex
     129581443
    REST complex
     129581443
    SHIP complex
     129581443
    MiDAC complex
     129581443
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129581443
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129581443
  Chromatin remodeling factors
   NuRD complex
    129581443
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 129581443
NCBI-ProteinID: XP_055328486
LinkDB
Position
Unknown
AA seq 470 aa
MESQALGAIRVRSDSAKKVAYYYNQDIGNFYYGQGHPMKPHRIRMVHSLILNYRLHLKMQ
CFRPHCSGMTELTRFHSDDYIRFLKTLSFGDEGKSPPSKKVLAEFNVGEDCPVFDGLYEY
CQAYAGGSVAGASKLNSESADIAINWAGGLHHAKKREASGFCYVNDIVLAILELLKFHQR
VLYVDIDVHHGDGVEEAFFTTDRVMTVSYHKFGEYFPGTGSVADVGAQGGKYYSLNFPLQ
AGIDDDSYEAIFVPVMTKVLEFYDPGAIVMQCGADSLTGDRLGCFNLTLNGHGKCLQFLK
KHGKPLLLLGGGGYTIKNVARCWAFETALAIGTDIANDLPYNDYFEYFAPDYKLHIPSSN
MENLNSKKELEKIQQTLLENLRHLAPVPSVGMFHAPASMDFSELEDMEQECADPDVRVPE
CVRDNIKENESDIMDIQEGGVPSGNRNRSGPSVVHSRVRCISETDDSLMD
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggaatcccaggcattgggagcgatccgtgttcgttcggacagcgcaaagaaggtagcg
tactattacaatcaagatatcgggaatttttattatggacaaggccatccgatgaagccc
catcgtatccgaatggtccatagcctgatccttaactatcgactgcacctgaagatgcag
tgctttcgtccccattgttccggaatgaccgaattaacacgcttccattcagatgattat
atccgctttctaaagacgttgtcctttggcgacgaagggaagagtcctccgtctaagaaa
gtactcgcggaattcaatgtcggagaggattgccccgtgtttgatgggttatatgagtat
tgtcaagcatacgctggcggatcagtagcaggtgctagcaaattaaattcggaatctgcg
gatattgccataaactgggccggcggacttcatcacgcgaaaaagcgggaagcttcgggc
ttctgctacgttaatgacattgtgttggccattttggaattgctcaagttccaccagcga
gtattatatgtggatattgacgtccatcatggtgatggcgtggaagaggcctttttcaca
acagaccgcgttatgaccgtgtcgtaccataagtttggagaatacttcccaggcactgga
agcgtagccgatgttggcgctcaagggggcaagtattattcgctgaactttcctctccag
gccggtattgatgatgacagttatgaggccattttcgtcccagtgatgaccaaggtgttg
gaattttacgatccgggtgccattgttatgcaatgtggagccgattccttaaccggcgac
cggctcggttgcttcaatttgacgctcaatgggcatgggaagtgcctgcagtttttgaaa
aagcacggaaaacccttgcttctgttgggtggaggcggatacacaatcaagaacgttgca
cgttgttgggctttcgaaactgcgctagccataggaaccgatatcgctaacgatctccct
tataacgattattttgaatattttgctccggactataaactgcacattccatccagtaat
atggaaaaccttaacagcaaaaaggaattggaaaaaattcaacaaacgttactggagaat
ctccgtcatcttgcgccggtgccctcggtcggcatgttccacgctccggcatcaatggat
ttcagtgaactagaggatatggagcaggagtgtgccgatccggatgtgcgtgtcccggaa
tgcgtacgagataatatcaaagagaatgaatcggatattatggatattcaggagggtggc
gtcccttccggtaatcggaatcggagtggaccaagcgtcgtgcacagcagagtacgttgc
attagcgaaacggatgattcgttaatggactag

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