KEGG   Paramacrobiotus metropolitanus: 129581490
Entry
129581490         CDS       T09028                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pmeo  Paramacrobiotus metropolitanus
Pathway
pmeo03082  ATP-dependent chromatin remodeling
pmeo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pmeo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129581490
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129581490
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmeo01009]
    129581490
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmeo03021]
    129581490
   03036 Chromosome and associated proteins [BR:pmeo03036]
    129581490
Protein phosphatases and associated proteins [BR:pmeo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129581490
Transcription machinery [BR:pmeo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     129581490
    SWI/SNF complex
     129581490
Chromosome and associated proteins [BR:pmeo03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    129581490
   PBAF complex
    129581490
   SWI/SNF complex
    129581490
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 129581490
NCBI-ProteinID: XP_055328583
LinkDB
Position
Unknown
AA seq 419 aa
MAAKDFEDTGNETTVEGMETDNDLSSQDRQTESQADAEMEVDGDGDKSRRPMVSTFGSRP
VPFKLEDDGDDYYIGSVVGNYLRMFRGQLYRKYPALWRRQTTPEERKRLAQMKGVDSHSV
SSNTILVKAKEVDEILAGYEEKYRLVSGDAEISQTPKEAKSRRASNWAPQPATSHHLDAV
PSATPISRARQLMRQPGRHHPFCFDDKPPLMMAKQAAQQEILVPIRLDMEIDNVKLRDTF
TWNKNELLITPEQFAEILCEDLDLPMVQFIPAIAQSIKQQVDAFPTDNLLNNQTDQRVVI
KLNIHVGNISLNDQFEWDMAEQQNSPEQFAARLCADLGLGGEFETAIAYSIRAQLTWHQS
VYSDATLPPIDCPFRNHDCDSWSPSIEVLSDAEMEKKLRDQDRNTRRMRRLAYNQGTSW
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggcagccaaagattttgaggatactggtaacgagaccacagtggaaggcatggagact
gacaatgatctgtcgtctcaagatcgtcagacagagagccaggcagatgcggaaatggaa
gtcgatggggatggagacaagtcgcggaggcccatggtcagcacgtttggcagtcgaccc
gttcccttcaaactggaagacgacggcgacgattactacattggatcagtagtggggaat
tatttgcgaatgtttcgaggccaattataccgaaagtatcccgcactttggagacgacag
actactccggaggaaagaaaacgtttagcgcagatgaaaggtgtggattcgcattccgta
tccagtaatacgattcttgtgaaagccaaagaagtggatgagattttagcgggttatgaa
gaaaaataccggctggtttctggggatgcggaaatatctcagacgccaaaagaagcgaag
tcgcggcgcgcttcgaattgggctcctcaacccgccacttctcatcatttggacgctgtt
cccagcgctacacccatcagtcgtgcccgccagttaatgcgccaacccggtcgacatcat
ccattttgtttcgatgataaacccccgctgatgatggcaaaacaggccgctcagcaagag
attctcgttcctattcgactggatatggaaatagataatgtgaaactcagagatacattt
acgtggaataaaaacgaacttctcattacgccggagcagtttgccgaaatactgtgcgaa
gatttggatcttccgatggttcagttcattcctgccattgcacaaagtattaagcagcag
gttgatgcgtttcccacggataatcttctcaataatcagaccgatcaaagagtggtaata
aagctaaatatccatgttgggaatatttccttgaacgatcagtttgagtgggatatggcc
gagcaacaaaacagccccgaacagtttgccgctagactgtgcgctgatttgggtctcgga
ggggaatttgagacagccatcgcttattcaattcgcgcacaattaacatggcaccagtca
gtgtacagcgatgctactttgccacccattgactgcccgttccgtaaccatgactgcgat
tcctggtcgccttccatagaagttctttccgacgccgagatggagaagaaattgcgcgat
caagatcgcaatacccgacggatgcggcgattagcgtacaaccaaggcacgagttggtga

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