Paramacrobiotus metropolitanus: 129581577
Help
Entry
129581577 CDS
T09028
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04140
Autophagy - animal
pmeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129581577
04148 Efferocytosis
129581577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmeo04131
]
129581577
Membrane trafficking [BR:
pmeo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
129581577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_HPS5
ANAPC4_WD40
Clathrin
Beta-prop_EML_2
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
BBS2_pf
NBCH_WD40
HIF-1
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
129581577
NCBI-ProteinID:
XP_055328703
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSKSPPSSSGTELPSFATTVLSRAADIASNVSDLLAESFNPISSPAVFESDASVRESSNV
PSVAGDSGSQDIRDDHSSSPEMPMSNGSASIDIDEAEDDTHDVEPKFKYERLFPDRNIES
ANILFRDSATALAVHPKLLALGTKNGEIHILDLQGNRISLSVPVPKHAGPVNDISLDEAG
DYMASAGDDGKVFVHGLYHTDDNYQVKHSEPVKTVAICPNFTAFGLSVANKSMVFGSRQL
ILCEKRFLGTKLTTLDPGDGRVTRIKWFGNFLAWGNRSGVKVMDMKEKQVIGLIPKDQRD
DGNDYPNKCEIFWMDSRTLLVAWPHVFSVCAIRDRRKLSNSSLSSGGLTKLPNFELVINK
LIHTEFAIAGIGPYVEDQFVLLGYNIVSKEDDKKVQMRIVRPKWEEFEDVTCDELPLRGA
LYATYEDYKLQSLPEDGLYFIVSPKDVVVAKPLDLDDVIDWLLERGRHEEAMKVAGKNNG
RTLVRHNIRDIGRQYVDYLRLKDNYEEAARVCPKVLGKDRIAWEEQVAEFYRAGKLRILA
PYMPRSADFQLTPGLYELVLASFLQDDHEGFLRMVKEWPATLYNVQAIINSVIEFLLRDP
NQKVLLESLTTLYTLVEQYDKALKICVKLKHPDVFELINKRSLYKTIVDQQLLVALMDID
AEQTVRLLTDNNERIPIASVVTQLQSRPQYLLQYLDRLFQMNKTIGKEYHDIQARLYAEY
EPKKLLHFMQNSKHFMLNTAFEVCEKKNMFPEMVYLLSRMGR
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagtcctcccagcagctcggggactgagctgccctcttttgccacgacagtc
ttgtctagagcagctgatattgcgagtaatgtgtcggatctgttggctgaatccttcaat
ccgatcagcagtccagcggtgtttgaaagcgatgccagtgtaagggaaagcagcaatgtt
ccatcagtcgctggggattctggttcccaggatatccgcgatgatcatagtagcagtccc
gaaatgccgatgagcaacggtagtgcttccattgatatcgacgaagcggaagatgacacg
cacgacgtcgaacctaaatttaaatacgagcggcttttccccgatagaaacattgaatcc
gcgaatatcttgttccgggacagtgctacagcactcgcggtacatcccaaattattggca
ctgggcacgaaaaatggggaaattcacatactggatttacaagggaataggatatcgcta
agcgttcctgttccgaaacatgcgggtcccgttaacgatatatccctggatgaagcaggg
gactacatggcgtccgccggtgatgatggcaaagtatttgttcatggtttataccacacg
gatgacaattaccaagtcaagcattcggaaccagtgaaaactgtggccatttgtccgaac
ttcacggcattcggcctctccgtagccaacaagagcatggtgttcggctcacggcagctt
attttgtgtgaaaaacgctttctggggactaaattaacaaccttggatccgggcgacggg
cgagtgactcgcattaaatggtttggaaattttttagcctggggtaaccgatccggtgtg
aaggtaatggatatgaaagagaaacaggtgattggtctaattcccaaagatcagcgggat
gatggtaatgattacccgaacaagtgtgaaattttctggatggattcacgaacactgctg
gtcgcatggccgcatgtgttcagtgtgtgcgccattcgggataggagaaaattatccaat
tcatccttgagttccggggggctaaccaagctgccaaactttgaactggtgatcaacaag
ctcattcatacagaatttgctattgcgggtattgggccctatgtagaagatcagtttgta
ttgctgggatataatattgtttccaaagaggatgacaagaaagtgcagatgcggattgta
aggccgaagtgggaagaatttgaggatgtgacctgtgatgaacttcctctgcgaggagct
ttatacgccacgtatgaagattataagctgcaaagcttgccagaagatggtttatatttt
attgtgagcccaaaggatgtcgtggtagctaagcctctggaccttgacgatgtgattgac
tggctactggagcgcggccggcacgaagaagctatgaaagtagctggtaaaaataatggg
cgcacgctggtacgacacaacatacgggacatcggacgacagtacgtggattatttacga
ttgaaagataattacgaagaagcggcacgcgtttgtcctaaagtgctgggtaaagaccga
attgcgtgggaagagcaagtggcagagttttatcgtgctggcaaactacgaattctagca
ccgtacatgccgcgctccgccgacttccagttgacccccggattgtatgaacttgtgctg
gcatccttcctgcaggatgaccacgagggatttcttcgaatggtgaaggaatggccagcg
acactttacaatgtccaagccattattaactctgtgatcgaattcctgctcagggatcct
aaccagaaggtcttgcttgaatcgcttaccactttatatacgctagtggaacagtacgat
aaagcgcttaaaatctgcgtaaaactcaaacatccagacgtatttgagttaatcaacaag
cgcagtttatacaaaaccatcgttgaccaacagttgctcgtagccttaatggatattgat
gctgaacaaactgtgcgtctgttgacggacaataatgaacgcattcccattgccagtgtc
gttacacaactgcagagccgacctcagtatttgcttcaatatctggacaggctgttccag
atgaataagaccatcgggaaagaataccatgacattcaagctcgcctctatgctgaatat
gagccaaaaaagctgctgcattttatgcaaaacagcaaacattttatgctcaatacggcc
tttgaagtgtgcgagaagaagaatatgtttcccgaaatggtgtacctcttgagtcgaatg
ggtaggtag
DBGET
integrated database retrieval system
