Paramacrobiotus metropolitanus: 129581637
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Entry
129581637 CDS
T09028
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129581637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmeo04131
]
129581637
Membrane trafficking [BR:
pmeo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129581637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
TPR_VPS8_2
Clathrin
ANAPC4_WD40
WD40_CDC20-Fz
zf_RING_Vps8_fungal
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf_RING_Vps8
zf-rbx1
zf-RING_Vps41
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_EML_2
zf-C3HC4
RING_XB3-XBAT31
HSM3_N
zf-RING_11
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129581637
NCBI-ProteinID:
XP_055328808
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MDDLNNPFALDMQEEARLTDVDAILEDLQNSQVSEFDLPPIGSLPTLESILDENDDDVGT
IFNQDPSLSFDSSASYTSAVEDAAVAFFDVVSSVSSIKKCAASLKAHDSIIKLAKLRNIT
TSISSAKPDAAINYGNPTVVLVGLKIAVGTSTGYVLVYDLNQTLIFRCPPPGKDAGAVSA
VDLNREERRLLVGFAKGMLALYDFASGKLLQTIEDAHSYDCSVLHIRYTDSTNSAIFLDN
GGSVFLLETKSTLGRRNSTSACIFSGSKGEAFAVEPLRIFDKFPLHRFSETSVVAVASLN
KVIIAEIKPALRSVFSFPINATPLKLPLLEWHIVTIQSSEAGKTIEPVLAVATGNGIVFV
QVSAETNRTVKCSFIQRTTVPADVVNMKWLNNYIVAVVDIDEKLHIIDIRNQNVLDSVDL
SFVGVVYQSSFFKGLATTRAVSQAMALAGNRACSQSIGTFQGQMVFLGVKGVFVASLRMW
FERVERLVSKGMPLEALRFVLDVYTGTATGVLGLTRNAVERKGILRRQVRNLIQMAADRC
LKSVPVHGKIDSLKEHYEAVIPLCIEACVSTGDLEYLFGPLYEKFAFDVMAKSVFLQCLE
PLILNDELHELSPIVSKDFIELYESRDQFATIESCIVRLDVTSFDIHQVVSVCRQYDLFD
GLAYVYLTAFKDARTPLEDYLLKLRKEMKDKPHLPDEIVALGNKVIVYMSCCLNGLKYPS
GIPNDDRTLQIAVEVFQTLLARHTRQPDSDEPVFAHLRTLLDFNARETLNVFVMAFNQPY
FNDAKGLELQQQLVDRLQQVVVQSTECEPGQVAGVFTFIARQMTKPDAKIVINRMLIEQT
LEVLCDPDDRQRHDERESAVIELYDSGVLKHISDKTVIKMAEDAKFFRLCEVLYEKHNMH
DKLLGCFLDDVHRKSQVFKFLQRVFVSPLYEKHDKKLVKEMCVTRFRDLLAIDRQKAAQL
TVTSLWNEVPLLLKTLEPDVQQQYIFMRSLYDFMSRIPFGAAQDTSAFPPQYHDIFIELM
CQVRPDVVGDHIRFNDDYDPDKVLAICRKYGLVKPEAYLLEKKGDTSKALEVLLDDLDKR
IQAYLVSQAKELSPTEYIRSLREMSESLILLTEFCQRIGSKMDHDKREKTWLIVLERMLE
AIRRVAAEVPEERKSDLRRLCVDFLKSMTGQVDLLVLLKKILEDPAYNRGKFGELRELLL
GIVDAYTYEEILLSSTRNLLHKDIHNQMSRMKRAVSKALSAKNDRCLICDASLLNTSYSE
PSESSNLAIFRCGHGFHTVCVKNVQSPLKETSQTTGKLDVLKCPECPRR
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttaaataatccatttgctttggatatgcaagaggaagctcgtcttacggat
gtggacgccattcttgaggatttacagaattcgcaagtatccgaattcgatttgccacca
attggatcactaccgactcttgaaagtattttggacgagaatgacgacgacgtgggaaca
attttcaatcaagatccatcgctgagtttcgactccagtgcgtcctacacttcagctgtg
gaggatgctgctgttgcgtttttcgatgttgtcagcagcgtatcatccattaaaaaatgc
gctgccagtttgaaagctcacgacagtatcatcaaattggcgaagctgcggaatatcaca
actagcatcagctctgcaaagccggatgcggcaattaattatggaaatccgacagtggtc
cttgttggcttgaaaatagcggttggtacatctactggctacgttctggtttacgattta
aatcagacacttatattccgatgtcctccaccgggaaaagacgcgggtgcagtttcggct
gttgatttgaatcgagaggaacggcgtttgttggtgggatttgccaagggaatgctggcc
ttgtacgactttgcgtcgggaaagttattgcagacgatcgaagatgcgcactcatatgac
tgttcggtacttcacatcaggtataccgacagtacgaattctgcgatatttttggacaat
gggggatccgtattccttttggaaacaaagagtacccttggtcggcgtaattctacgtct
gcgtgcatattttccggaagcaaaggagaagcatttgcagtggaaccactaagaatcttc
gataaatttcccttgcatcggttttcagagacctcagtagttgctgtagcatcgttgaat
aaagttatcatagcggaaataaagccagctttacgttcagtattttcatttccgataaac
gccacgcctttgaaactaccgcttttggaatggcatattgtaacaattcagagcagcgag
gctggaaagaccatcgagcccgtgcttgctgtagcgacgggaaatgggattgtttttgtg
caggtttctgctgaaacaaatcgcactgtgaaatgttcattcatccaacggacaacggtt
cctgctgacgttgttaacatgaagtggttaaataattatatcgttgctgttgtggacatc
gatgaaaagttgcatattatcgacattcgcaatcagaatgttttggattccgttgatttg
agttttgttggagttgtctaccagtcaagtttttttaaaggattggccacgacaagagcc
gttagtcaggcaatggcgttggctggtaatcgtgcctgttcacagtctattggtacattc
caaggacaaatggtgtttctgggagttaaaggagtttttgttgcttccttgcggatgtgg
tttgaacgcgttgaacgcctggtatcaaaaggaatgcctctggaagcgctgcgctttgtg
ttggatgtatatactggaacggctacaggagtactgggtttgacgagaaatgctgtggag
cgcaaaggaattttacgacgtcaagtgcgaaatttgatacaaatggccgcggatcgttgc
ttgaagtctgtacccgttcacgggaagatcgactctctgaaggaacattacgaagcagtt
attcccttgtgcattgaagcatgcgtttcaactggagacttggagtatttatttggacca
ctgtatgagaaattcgcgttcgatgttatggccaaaagcgtcttcctgcagtgccttgag
cctttgatactcaatgatgagctgcatgaactatctcccattgtctccaaagattttatt
gaattgtacgaatcgcgggatcagttcgccacaattgaatcgtgtattgttcggctagac
gtcacatctttcgacattcatcaggttgtcagtgtctgcagacagtacgatttattcgat
gggttggcctatgtatatctgacggcattcaaagatgcccggactccgctggaagattat
ttgttgaagctacgaaaggaaatgaaggataagccacatttgcccgatgaaatagttgct
ttgggcaacaaggtcatcgtatacatgagctgctgcttaaatggcctcaagtatcctagt
ggtattcctaacgacgaccgcacactgcaaatagccgtggaagtatttcaaacattacta
gcacgtcatacgcgacagccggatagtgatgagcctgtatttgcgcatctccgcacactt
ttagattttaacgccagagaaactttgaacgttttcgtgatggcttttaaccagccttac
tttaacgatgcgaaaggtttggagttacagcagcagctggtcgatcgcctgcaacaggtg
gttgtacaatccaccgaatgtgagcctgggcaagttgccggtgtgtttacgtttattgcg
cgtcagatgactaaacccgatgccaagatcgtgatcaataggatgctgattgaacagaca
ttggaagtattatgtgacccagacgatagacagcgtcacgacgagcgagaatctgcggta
attgaactgtatgattcgggcgtgttaaagcacatcagcgataaaacggtcattaaaatg
gcggaagatgcgaaatttttccgcctgtgcgaagttttatatgaaaaacacaacatgcac
gataaacttcttgggtgttttctggatgatgtccatcggaagtctcaagttttcaagttc
ttgcaaagagttttcgtcagcccgttgtatgaaaaacacgataagaagctggtgaaggag
atgtgcgtcacacgttttcgggatttgttggcaattgaccgacaaaaagcagcccagttg
accgtgacttcgttgtggaatgaagtaccattacttctgaaaacattggagccagacgtt
caacagcagtacatttttatgcgatcgctttatgacttcatgtctcgcattcctttcggc
gcagcgcaagatacaagcgctttcccaccgcaataccatgacattttcattgagttgatg
tgccaagtccgaccagatgtagttggtgatcacatccgattcaacgacgattacgaccca
gacaaagttttagctatatgtcgcaagtatggtttagtcaaaccggaagcatacttactg
gagaagaaaggcgacaccagcaaagctctggaagtcctattggacgatctagataaacgc
atccaagcctatttggtgtcccaggcgaaagagttatctcctaccgaatatatacgaagt
ttacgggaaatgtcagaaagtttaatattgttgacggaattctgtcagcgcattggaagc
aaaatggatcacgataagcgtgaaaagacatggttgatcgttctggagcgaatgctggaa
gctatacggcgtgttgccgcggaagttcctgaggagcgaaagtctgaccttcgtcgactt
tgcgtggattttctgaagagtatgactggtcaggttgatcttctggttttattgaaaaag
attctggaggatccagcatataaccggggtaaatttggagaattacgggaacttctgttg
ggtattgtagatgcatacacttatgaagagatcttactgtcttctacaagaaacctgttg
cataaagatattcacaatcaaatgagccgcatgaagcgagctgtttccaaagctttatcc
gcaaagaacgatcgatgcctgatttgtgatgcttctttattgaatacgtcttactcggaa
ccctcagaaagctccaatttagctattttccggtgcggacatggatttcataccgtttgt
gtaaaaaatgttcaaagcccattgaaagaaacgtcacaaaccacggggaaactggacgta
ctgaaatgtccagaatgtcctcgcagatag
DBGET
integrated database retrieval system
