Paramacrobiotus metropolitanus: 129581902
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Entry
129581902 CDS
T09028
Name
(RefSeq) nuclear exosome regulator NRDE2-like isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
pmeo
Paramacrobiotus metropolitanus
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129581902
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129581902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
Suf
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
129581902
NCBI-ProteinID:
XP_055329169
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MSLFPAFADQRKPDLAIYTPEIQQHTPDVDVQIVGNVTIPAKSKLPSFSFDATTVTAQLQ
DVRRAQASSERDVIDVYSSGEEEERRLRKMQRKRKKAEKRERKKERRANQRAPPQPPKTV
KTDPAQQQPKIKFLEQSGLSAETAFCVADKPEKINFAFDATYWKDVSKIQRPPRWTLGPT
RKNSQFSVPLERYFNAKVELEFMKKFSGVRIPRRTDVVPFGRNYLPFPEEELSVPAEEKI
FDQSDPFRARTVQFNERLRENPTDLRLWLEFLNFQEDIIENAFTAGKSKDDGLSTRNGLI
QRKIAIIERAIAENPADIDLKIRRLNFCEEVWEKDELAKEWRKLAFTYPNDPFVWKAYYE
FQRSYFPLFQVTRTCKLFPKFISISRSMLEGTFQSHSPLPNHEHHLVLFIFLLVSFWMQS
GHNEKATGLLQGLLEFNLRFPENLAANTPIKDALVFFEPFWDSGAPRFGSENARGWNNVM
KTKDQSIPKNNLDNSVDSDENQLIKDSSSVMELWLKLERYRQNRFLLPFSGDDEPTDPER
VVLFDDIESYLFRFPLDLQSSDYQDITFFMVIISLNVLRCPLPRCFSTRSCAWRTMLADM
LENPWTTLFGNWSEAHANGALPDSFALPLLQPLANGWADSETLIVGIFEQSSQVLQGFQS
SFLVACYLQFKLSKFISSPGSSKSAVAKDIRTTAKTLLKQPKNRNDLIIWEWYAFAEGVL
EDSPLASSKILELILTSTIPDKSPSQTLLLARLVRFYVMNSLGLLNGSKLQDASLRTVAL
SVLVQFIENRQITFNITEELHGNRVLKARKAFEHLAAGCPPLSADPTGGLHALGSMRCNV
AICWALFEYLSSGHENAVKTLSEFLTGCRNHPGSAFDVGYEKNLMDWEILTEFMVMLNQF
HQKNGQLPSESVRDAIHYALLDFPDNPYLLTVFIKNELKAFVSGRIRAYFDRSVRDAATV
IPWIFAVYAEYERKYCLWRNLNAAYDQKFSDEISLKTFRDTGISHKIRALFERAVTSEVG
RHCPLLWRMYLKFECEEDNLARAEGIYYRAIQSCPWAKAVYMDAAACFPQRIPEIIDVMT
EKELRVMVPFEEAQLLMSAKDEIKATEQDHSSSTFAGD
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttttccccgcatttgcggaccagagaaagcccgacctcgctatttatacaccg
gaaatccagcagcatacgccggatgtcgatgttcaaatcgttggaaatgtgacgattcca
gctaaaagtaaattgccgagcttctcttttgatgctactaccgtcactgcgcagctgcag
gatgttcgacgagcacaggcttcatcggaacgagatgtcattgatgtgtattcatccggc
gaagaggaagaacggcgcctgcggaaaatgcagagaaagcgcaaaaaggcggagaaacgc
gagcggaaaaaggagcgccgtgctaaccaacgagcgccaccgcagccgcctaaaactgta
aaaaccgaccctgcgcagcaacaacccaaaattaaattcttggagcagtctggtttatca
gcggagaccgccttttgtgtggcggataaaccggagaaaattaatttcgcgtttgatgca
acgtactggaaggatgtgtccaaaatccagcgaccgcccagatggacgttgggaccgact
agaaaaaattcgcaattttctgtacccttggagaggtattttaatgctaaagttgagctg
gaattcatgaagaaattctccggagtacggattcccaggcgaaccgacgtggtaccgttt
ggtcgaaattatctgccttttccggaagaagaattgtccgttccagctgaagaaaaaata
tttgaccagagtgatccatttcgcgcgcgtactgtgcagtttaatgaacgtttacgtgaa
aatccaactgatctccgtctgtggctggagtttttaaacttccaggaggatatcattgag
aatgcatttactgccgggaaatccaaggatgatggattatcgacacgtaacgggttaatt
cagcggaaaattgccattatcgagcgagctatcgcggaaaaccctgctgacatagacctg
aaaattcgccggctgaatttctgtgaggaggtgtgggaaaaagatgagttggccaaagaa
tggcgaaaattagccttcacgtatccaaacgacccttttgtttggaaagcctattatgaa
tttcagcgctcatattttcctcttttccaagtgacaagaacatgtaaactgttcccaaaa
tttatctcgatctcgcgcagcatgctggaagggacattccagtcgcattcaccgcttcct
aatcacgaacaccatctggttttgtttatttttttactagtcagtttctggatgcagagt
ggtcataacgaaaaggccacaggattgttacaaggtttgttggaattcaacctgaggttt
ccggaaaacctcgctgccaatacccccatcaaagatgctcttgtcttctttgaaccgttt
tgggattccggagctcctaggtttggctcagaaaatgcccgcggatggaataacgtgatg
aaaacaaaagatcagtccattccgaaaaataatctggacaattccgttgatagtgacgaa
aatcaattaatcaaagactcgtcttcggttatggaattgtggttgaaactggaaagatac
cgacagaatcgcttcctcctcccatttagtggcgatgacgaaccgaccgatccggagcgg
gttgttttgttcgatgatattgaatcatatttatttcggtttccacttgatctgcagtca
tctgattatcaggatattaccttttttatggtgattatcagtcttaatgtgctccgatgt
ccacttccccgttgcttctctacgcgcagttgcgcctggcgcaccatgctggcggatatg
ctggaaaatccatggactacgctgtttggaaactggtcggaagcgcacgcaaatggtgct
ttgcctgactcctttgcgcttcccttacttcagccacttgcgaatggctgggccgactcg
gaaaccttgattgttggaatttttgagcaatcttcccaagtacttcaaggttttcaatcc
tcattcctggttgcctgttacctgcagttcaaactctcaaagtttatttcctcaccgggt
tcatcaaaaagcgcagtcgcgaaagacatacgcaccaccgccaaaacgttgcttaaacag
ccaaaaaatcgtaacgatctcattatttgggaatggtatgcattcgcggaaggcgtgcta
gaagacagtcccttagcatcatcaaagattctggaactaatcctcacttcgaccatcccg
gataaaagcccgtctcaaacactacttctggctcgacttgtgcgcttctacgttatgaac
tcgttaggactgcttaatggatcgaaactgcaagatgctagccttcggactgtagccctc
agtgtccttgtgcagtttatcgaaaatcgacaaattacatttaacataaccgaagaatta
cacgggaaccgcgttctgaaggccagaaaagcctttgagcacctggctgcaggatgtccg
ccgctatcagctgatccgaccggaggattgcacgctctgggtagtatgcgctgcaacgtt
gctatttgttgggcattgtttgagtatttgtcgtctggccatgaaaatgcagtgaaaact
ctcagcgaatttctgacaggatgccgaaatcatcccggaagcgcatttgatgtgggttac
gagaagaatttaatggactgggagatattgacggaatttatggtgatgcttaatcagttt
catcaaaagaatggccagcttccgagcgaaagcgtgcgagatgctattcactatgctttg
cttgattttcctgataatccgtatttgttgacagtttttatcaagaacgagttgaaggcg
ttcgtgagtggacgaattcgtgcgtatttcgatcgcagtgtgcgggacgcagccaccgta
attccctggatatttgcggtgtacgctgaatacgagcgtaaatactgtctctggagaaac
ctcaatgccgcgtatgaccaaaaattttctgacgaaatttccctgaaaacgtttcgggac
accggaatctcccacaaaattcgagcgctttttgaacgagcggtgacatcggaagttggc
cgacattgtccattattgtggcggatgtatttgaagtttgaatgcgaagaggataactta
gctcgtgcggaagggatatattatcgggccatccagagctgcccgtgggcaaaggcggtc
tatatggacgctgcagcatgtttcccgcaacgaattcccgagattatcgacgtgatgacc
gagaaagagctgcgagttatggtgcccttcgaggaagcccagttattgatgagtgccaag
gacgagattaaggccacagagcaggatcattcttccagtacatttgctggcgactga
DBGET
integrated database retrieval system
