KEGG   Paramacrobiotus metropolitanus: 129582067
Entry
129582067         CDS       T09028                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
pmeo  Paramacrobiotus metropolitanus
Pathway
pmeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129582067
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmeo03041]
    129582067
   03036 Chromosome and associated proteins [BR:pmeo03036]
    129582067
Spliceosome [BR:pmeo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129582067
 Complex B
    129582067
 Complex C
   U2 SnRNP specific factors
    129582067
Chromosome and associated proteins [BR:pmeo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    129582067
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_2 HEAT_ECM29 Htt_N-HEAT_1 mTOR_dom XMAP215_CLASP_TOG
Other DBs
NCBI-GeneID: 129582067
NCBI-ProteinID: XP_055329436
LinkDB
Position
Unknown
AA seq 1281 aa
MAHIAKTTADLEAQMEAMRKKGAENRLEDGRFVGLGEEGVFDEDIYSAPAKKGKFEGYVT
SIGGQEEEDDDEEEMRPGLGRQAAYKVAQTAIRETAASGQDVDPMAEHRRARVIDRENDY
QKRRQRIQLSPDRLDPFADGGKTPDVASRTFSHVMREQGVKRDTQEVRQQLAEKAKAGEL
HSVGNGEAKPAAKKRARWDVATPDVTAVASVSGSEATPLQPPKWDSTPSHVPAGSSTPSA
PSGVAHWAATPVAAAAPALKRNRWDETPRATSGAETPAAAGWAETPRADRTPGGGQETPS
VSKRKSRWDETPQATPSAMTPMMTPNMTMATPFGVKAMGMATPTPGHLMNMTPEQIQAFR
FEKEMDDRNRYLTDEELDALFPPGYKVLPAPAGYQPIRTPTRKLLATPTPMSGVGGFFMQ
TEAAASSNKNILNAQPQDPELPMLKPEDTQYFDKLLQEVDEENLSPEEQKERQIMKLLLK
IKNGTPPMRKSAMRQITDKARTFGAGALFNQILPLLMSPTLEDQERHLLVKVIDRVLYKL
DDMVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISVMRPDIDNIDEY
VRNTTARAFAVVASALGIPSLIPFLKAVCKSKKSWQARHTGIKIVQQISILMGCAVLPHL
RSLVEIIEHGLEDEQQKVRTITALSLAALAESAAPYGIESFDSVLKPLWQGIRTHRGKGL
AAFLKAIGFLIPLMDAEYASYYTREVMIILIREFSSPDEEMKKIVLKVVKQCCGTEGVEA
QYIRDEILPHFFRAFWNHRMALDKRNYKQLVETTVEIANKVGASTIIAKVVDDLKDENEQ
YRKMVMETIEKVLEALGSADIDNRLEEQLIDGILYAFQEQTTEDVVMLSGFGMVVNSLGK
RCKPYLPQICGTILWRLNNKAAKVRQQAADLISKVAGVMKTCNEEKLMGHLGVVLYEYLG
EEYPEVLGSILGALKGIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIA
DRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKV
QERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKALSFMFEYIGEMGK
DYIYAVTPLLEDALMDRDLVHRQTACSAVGHMALGVYGFGCEDALNHLLNLVWPNIFETS
PHMAQAFMAAVEGMRVSLGPLRLLQYVLQGLFHPARRVRENYWRVYNTLYIGAQDAMVAA
YPKVPNDGNSVYERCELDYVL
NT seq 3846 nt   +upstreamnt  +downstreamnt
atggcgcatattgctaaaaccactgctgatctggaggcccagatggaggccatgcgcaag
aagggtgcagagaaccgtcttgaggatggtcgatttgttggattgggagaggaaggggtg
ttcgacgaagatatctactcagctccagcaaagaaagggaaatttgaaggatatgttacg
tcgattggtgggcaagaagaggaagatgacgacgaggaagagatgcgacctggtctggga
aggcaagccgcatacaaagtggcccagacagccatccgagagacagcagcctctggacag
gatgtggatcctatggcggagcatcgtcgagccagagtaattgatcgcgaaaatgactat
cagaagcgtcgacagcgtattcagttgtctccagatcggcttgatccttttgcggacggt
gggaaaactccggatgtggcttccagaactttctcccatgttatgcgagaacagggcgtg
aaaagggatacacaagaagttcgccaacaattggccgagaaagcgaaggctggtgagctg
cactcggtgggcaatggagaagctaaaccagcagcgaaaaagcgagcgagatgggatgtc
gctacaccggatgtcactgccgtcgccagcgtttctgggagcgaagccacccctcttcaa
ccaccaaaatgggactctacgccctcccatgtcccggctgggtcgtccaccccatctgcc
ccttctggtgttgcccactgggctgccactccagttgcagccgccgcaccggccctgaaa
cgcaatcgttgggatgaaacgccgcgcgccacgagtggtgccgaaacaccagcggctgct
gggtgggcggaaactcctcgagctgatcgaactcccggtggcggtcaggaaactcccagt
gtatctaaacggaagtcgcgttgggatgaaacgccgcaggccacaccgtcggctatgaca
cccatgatgactcccaacatgacgatggcgacgccgttcggcgtgaaggccatgggaatg
gcgacaccgactccgggacatttgatgaatatgacccccgaacagatccaggccttccgg
ttcgaaaaggaaatggacgaccgtaatcgctatctcactgatgaggagctggatgcgctg
tttccgccgggatacaaagtcctgcctgccccggccggttatcagccgattcggactcca
accaggaaactgctggcaacaccaacgcccatgtcgggagtcggaggattctttatgcag
accgaagctgctgctagtagtaacaagaatattttgaatgcgcaaccacaggatccagaa
ttacctatgttgaaaccggaagacacgcagtattttgataaattgctccaggaagtggat
gaagagaatctatcaccggaggaacaaaaggaacgtcagattatgaaattgcttctaaaa
atcaagaacggcacgccgcctatgagaaaatccgctatgcgtcaaattaccgataaagcg
cgcaccttcggggcaggagcgcttttcaatcagattttgccgcttctgatgtctccgact
ctagaagatcaggagcgccatttgctggtaaaagttattgatcgcgttttgtacaagctc
gatgatatggtccggccgtatgttcataaaattctggtcgtcattgaaccgctgttaatt
gatgaggattattatgctcgcgtcgaagggcgagaaattatttcgaacttggccaaagcg
gctggactggccacgatgatttcggttatgcgtccagatattgataacatcgatgaatac
gtccgtaacacgacagctcgggcttttgccgttgttgcatcagcgcttggtattccttcg
ttaattcctttcctgaaagcagtgtgtaagagcaagaagtcatggcaggcacggcacact
ggtatcaagattgtccagcagatctccattctgatgggttgtgcggtattgccccatttg
cgaagtttggtcgagatcatcgaacacggattggaggatgagcagcaaaaagtacgaact
atcactgcgttatccctggcagcgttggctgagtccgctgcgccatacggtatcgaatcg
ttcgacagcgtgttgaaaccactgtggcagggtatccgaacgcatcgcggaaaaggtttg
gcggcattcttgaaagccattgggttcctcattcctcttatggacgccgaatatgctagt
tactatactcgtgaagtgatgattattttgattcgagaattttcgtctcccgatgaggaa
atgaagaaaattgtattaaaagtcgtcaagcagtgctgtggcacggaaggtgtggaagct
cagtacattcgcgatgaaatcctgccgcattttttcagggcattctggaatcatcgaatg
gcattggataagcgaaattacaagcagcttgtcgagacgacggtagaaattgccaataaa
gtcggtgcgtcgacaatcattgcgaaagtggtggatgatttgaaggatgaaaatgaacaa
taccgcaaaatggtgatggaaaccattgagaaagttctggaagcgttgggctccgcggat
attgataaccgtctggaagagcagctgattgatggcatattgtatgcttttcaagagcag
acaacagaagatgtggtgatgcttagcggttttggtatggttgttaattcactgggaaag
cgctgcaagccatatttgccgcaaatttgtggtaccatcttgtggcgtttaaacaacaag
gcagccaaagtgcgacagcaggcggcagatttaatttcaaaggttgccggggtcatgaaa
acttgcaacgaagaaaagttgatgggtcatctgggtgttgttttatatgaatatttgggt
gaagaatatcccgaagtattgggtagtattttgggcgccctgaagggtattgtaaatgta
attggaatgaccaagatgactccgcccataaaggatctactgccacgattgacccccatt
ttgaagaatcgtcacgaaaaggtccaagagaactgtattgatctcgtgggacgtattgcc
gatcgaggagctgaatatgtcagtgcccgggagtggatgcggatctgcttcgaattactg
gagctgctgaaagctcacaagaaggccattcggcgagctactgtcaacacgtttggatac
atcgcaaaggccattggaccgcatgatgtactcgcaactttgttgaacaacctgaaggtt
caggaacgtcagaatcgtgtctgtacaaccgtggctattgccatcgtggcggaaacgtgc
tccccgtttactgtgttgcctgcgttaatgaatgagtatcgtgtaccggagcttaacgtg
cagaatggtgttttgaaggcattgtctttcatgtttgaatacattggtgaaatggggaag
gactacatttatgctgttacgccgcttttggaggatgcacttatggacagagatctggtg
caccgacagaccgcctgttcagcagttggacacatggctttgggagtttatggttttggt
tgtgaggatgcgttgaaccatttgttgaatttggtatggccgaatatcttcgaaacatcc
ccgcatatggcgcaagcttttatggctgccgtggaaggcatgcgtgtatcactgggtcca
ctccgtctgcttcagtacgtgctgcaggggctgtttcatcctgctcgtcgtgtccgggaa
aactattggcgtgtttacaacacgctttacatcggagcacaagacgctatggtcgccgcg
tatcctaaggttccgaacgatggtaacagtgtgtatgaacggtgcgagctggattatgtg
ttatag

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