Paramacrobiotus metropolitanus: 129583243
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Entry
129583243 CDS
T09028
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04140
Autophagy - animal
pmeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129583243
04148 Efferocytosis
129583243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmeo04131
]
129583243
Membrane trafficking [BR:
pmeo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129583243
Hops complex
129583243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
TPR_GEMI5
VPS11_C
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-C3HC4
Beta-prop_EML_2
WD40_like
zf-C3HC4_3
TPR_11
Spectrin_7
Motif
Other DBs
NCBI-GeneID:
129583243
NCBI-ProteinID:
XP_055330942
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MALNQWRKFAFFDKKLLKNEAGDTLDALKSYKIWSTTFGRGKMIFGDSEGWIVVMDYKQN
VTSFRGYLLQVSHLFMTKQQNILVSVGEDSAEQGPMLKVWNFDKMDGGDNPSCSRMIRLN
FRNTQELVSCFVVHENLNYLAIGYSSGVVILLKGDITKERNTSKHVVLHEGKSTITGLSF
RPTTTAKGGIVLFISSMDEIWSYMIGGRDKEIGSVLDHHGCGLMCSTMTDSSTDYQFVIG
RADALYFYLPDSRGQCLAFGGTKLLLEWCHGYLVVVSRKEESETRSTLSGSDSGAGEMQI
ITIYDVKNKLIAYYGPIQEVRAILCEWGSIFILCTDNKIYQIKEKELLQKLDMLFKKNLY
SLAITLAKAQQYDQDALIDMFRQYGDHLYSKGDFDEAMAQYIKTIGRLEPSYVIRQFLDA
QRIYNLTAYLSALHDSNLASQDHTTLLLNCYTKLKDEEQLDKFIMSKNSNHAVNFDVETA
IRVLRQSGYFRHALHLAKTHQKHDWYLKIQLENNKDFVEALDYISKLEFESCEANLKCYG
RLLISHASEQCTELLKKLCTDYAPKSDKVEAISSSSVHMAANPEDFFHIFVNHSGLMCEF
LEYVANCRSDLSPEFYNTLLELYLENWKNTGQQAIKDSLEQKIMRLLQQENCCDPMQALL
LCQLNDFAPGILYMFEQKHMYTEILQFFMDRHSFEQVVQTCRRFGDKESHLWVQAFWFFS
ESFGEYDKSWIAEVLKVIETKNLLPSLMVIDILSRNPNTTLDIIRDYVISRMKSDEKKIQ
DDEAQIQKFREKTEQIRKEVDQIKNGAQIFQDANCSACDKSLELPSVHFMCRHSYHQHCF
DSYSDTDEECPICRPENRKLLDEINAQEQNRDLSQQFFSRVNKEIDSFSVVAEYFGKRLF
GRQTPIDDLLHPGDRL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaatcagtggcggaagttcgcgtttttcgacaagaagcttctgaagaacgaa
gcgggcgatactttggatgccctgaagtcatacaagatatggtcgacgacattcgggcgc
ggaaagatgatatttggggattcggaggggtggatcgtagtgatggactacaaacagaat
gtcacttcttttcgcggctatcttctccaagtgtcccatcttttcatgaccaaacaacag
aacattttagtctctgttggggaggacagtgcggaacaggggccaatgttgaaagtatgg
aattttgacaaaatggatggcggggataatccgtcatgttcgcggatgatccggttgaat
ttcagaaacactcaggaactggtgtcctgctttgtggttcacgaaaacctgaattatctt
gccattggatacagcagcggtgttgtgattctgttaaaaggtgatattacgaaggaaagg
aacacaagcaaacatgtcgtactgcacgagggtaaaagcaccatcaccggtttaagcttt
cgacctaccacaacagcaaagggtggcatcgtgctatttatttcctccatggatgaaata
tggtcgtatatgataggaggtcgagataaagaaattgggtcggtgttggatcaccatgga
tgcggattgatgtgctcaacgatgactgattcttcgacagactatcagtttgtcattggc
cgagcagatgcgctttatttttacttgccggatagtcgtggacagtgccttgcatttgga
ggtacgaagttgttgctggaatggtgccacggatatcttgttgtggttagccgaaaagaa
gagagcgaaacgcggagcacattaagcggcagtgattccggagctggtgaaatgcagatt
attaccatctacgatgtcaaaaataagcttatagcatattatggtccgatacaagaagtt
agagccattttgtgcgaatggggctcaatttttatcctctgcacagataacaagatatac
caaattaaagaaaaagagttgctccaaaaactggacatgcttttcaaaaagaatttgtac
tctttggctataacgcttgccaaggcgcagcaatatgatcaggacgccttgatcgatatg
ttccggcagtacggtgaccatctgtacagcaaaggggactttgatgaagctatggctcag
tatatcaaaacaattggacgattagaaccttcttatgttatccgtcagttcctggatgct
cagcgaatctataatttgacagcttacttgagtgcgttgcatgacagtaatttggcttcc
caggaccatacaacgctgttattaaactgctatacaaaactaaaagacgaggagcagctg
gataaatttattatgtcaaagaattcaaatcatgctgtcaacttcgatgtggaaacagct
atccgggtattgcgacagtctggatattttcgacatgctttacacctcgcgaaaactcac
caaaagcacgattggtacttgaagattcagctggaaaacaacaaagattttgttgaagct
ttggattatatttcgaaattagagttcgaatcatgcgaagccaatttgaaatgctacgga
cgccttctgatatcgcatgcaagcgagcagtgcacggaattgttgaaaaagctgtgcaca
gattatgcgccaaaaagtgacaaggtagaagcaataagtagcagctcggtgcatatggcg
gccaatcctgaagacttcttccatatttttgtcaatcattctggattgatgtgcgaattt
ttggaatatgtagccaattgtcgaagcgatctttcccctgaattctataatacgctactg
gagttatatcttgagaactggaagaataccggtcaacaagccatcaaagacagtttagag
cagaagattatgcgcttgctccagcaagagaattgttgtgatcctatgcaggcgttgctt
ttgtgccagttgaacgatttcgctccaggaattctgtacatgttcgagcaaaaacacatg
tacaccgagatcttgcagtttttcatggatcggcatagttttgagcaagtggttcagact
tgtcggcgctttggggacaaggaaagccatttgtgggtgcaagcgttctggttcttttcc
gaaagttttggggagtacgataagtcatggattgcggaagtattaaaagtcatcgagaca
aaaaatttgctaccttcacttatggtaattgatatactatccagaaatcccaacacaacg
ctggatatcattagagattatgttattagccgaatgaaatcagacgagaaaaaaatccaa
gacgacgaagcgcaaattcaaaagtttcgcgaaaaaacggaacaaattcgaaaagaagta
gatcagataaagaatggagcgcaaatttttcaagatgccaactgtagtgcttgtgacaag
tctttggagttgccatccgttcattttatgtgtcggcattcttaccatcagcactgcttt
gatagctattccgacactgacgaagagtgtccaatttgccgtccggaaaatagaaaatta
ctggatgaaatcaacgctcaggagcagaaccgagatttatcacagcagtttttctcccgc
gttaataaggaaatagatagtttttcggtggtggctgaatatttcggcaaacgattgttt
ggacgacagacaccaattgatgatcttttgcatcctggagatagactttaa
DBGET
integrated database retrieval system
