Paramacrobiotus metropolitanus: 129583660
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Entry
129583660 CDS
T09028
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03018
RNA degradation
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129583660
09123 Folding, sorting and degradation
03018 RNA degradation
129583660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129583660
03041 Spliceosome [BR:
pmeo03041
]
129583660
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129583660
mRNA degradation factors
5'-3' decay
Lsm complex
129583660
Spliceosome [BR:
pmeo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129583660
Complex C
U2 snRNP components
129583660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
129583660
NCBI-ProteinID:
XP_055331523
LinkDB
All DBs
Position
Unknown
AA seq
124 aa
AA seq
DB search
MLFYSFFKSLIGKKIVVELKNDMSLGGTLDSVDQYLNMKLMDVAVTDPAKFPHMLAVKNI
FIRGSVIRYVHLPAEEVDVELLQDASRRDAQQAKTQAKTQSSTKPQPQQRSAVPSTGGGA
NVVG
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttattcctttttcaaatccctcatcggcaagaagatcgtggtggagctcaaa
aatgacatgagccttggaggcaccctggattcagtggatcagtatttgaacatgaagttg
atggacgttgctgtgacggatccggcgaagttcccgcatatgctagcggtgaagaatatt
tttatccgcggttcggtcattcggtatgttcacttgccagcggaagaagtggatgtggag
ctgctgcaggacgcttctcggcgcgacgctcaacaggccaagacccaagcaaaaactcag
tcttctaccaaacctcagcctcaacaacgttctgcggtgccgtcaaccggtgggggagca
aatgttgttggttaa
DBGET
integrated database retrieval system
