Paramacrobiotus metropolitanus: 129583896
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Entry
129583896 CDS
T09028
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03030
DNA replication
pmeo03410
Base excision repair
pmeo03420
Nucleotide excision repair
pmeo03430
Mismatch repair
pmeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129583896
03410 Base excision repair
129583896
03420 Nucleotide excision repair
129583896
03430 Mismatch repair
129583896
03440 Homologous recombination
129583896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmeo03032
]
129583896
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129583896
Enzymes [BR:
pmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129583896
DNA replication proteins [BR:
pmeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129583896
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129583896
MMR (mismatch excision repair)
DNA polymerase delta complex
129583896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
129583896
NCBI-ProteinID:
XP_055331897
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MVFVMFNSGNRGRGRSVTNALGSNRGRGASSSFNGGRGGFNSSSSAGRGNARGGRGSGGN
ANGTPAFLTQYTKSMPLSKQNSVEDDEEMDYDAFQDDFDVDMPDDDMVSGDSLTAPDQGT
DSLDGALSKAWGRPQVAEIDPSRDTLVFQQVEVDHTIEHAVPGLSSFQGQGPVIRLFGST
MDGRSVLCHVHGFHAYFYVQIPDDIEPAKTLQYSKQFHTDLNRRLMQESTVSRALSSGSQ
GVASGVAVIQTEVVKKQDLYAYHGGTNEMRNLKRFLKVIVAQPRFIAPARRVLEDGSFGR
VFVTYESNVEFEIRFMVDAEVYGCNWIELPAGKYKTRTTSSKFSPEFQSGKATVSRCQIE
VDVKWENMKSHYPDDEWSDMAPFRILSFDIECAGRKGIFPEPNCDPVIQIASMVQRNGEK
EPFIRTVFTLKKCAPIVNSKVVCFETEEDLLDNWATFVRLVDPDIVTGYNIQNFDFPYLI
DRAAHLKRSRFPFLGRLKNTVTRVREVQLQSKQMGARKNKFCNIEGRVTFDLLQVLLRDY
KLRSYTLNAVSYHFLQEQKEDVQHSIITDLQNGNEHTRRRLAVYCLKDAWLPLRLIDKLM
SLVNYMEMARVTGVPLSYLLARGQQVKVVSQLLRAAAKEAYVMPARHVQTGDEFTGATVI
EPKTGYYTKPIATLDFASLYPSIMMAHNLCYTTLIEKGKLAELNLSPDEFIKTPSGDTFV
KATVVKGLLPKILENLLATRKKAKADLAKETDPLRKKVLDGRQLALKISANSVYGFTGAQ
VGKLPCLEISGSVTAFGRYMIEESKKHTEEHFTKANGFAHDAEVIYGDTDSVMVNFGVDT
LEEAMKLGRQAADIITQKFVKPIKLDFEKVYFPYLLINKKRYAGLYFTNTETHDKMDCKG
IETVRRDNCPLVANLIDMCLQKLLIDKDKEGAISYAKQTISDLLCNRVDISQLVITKELT
KKDGEYKAKQAHVELAHRMHKRDAGSAPNLGDRVPYVIIAAAKGTPAFEKSEDPIYVLEN
NIPIDTQYYLENQLSKPLVRIFGPILGSEDKAESVLLRGDHTRTKTIVTSKVGKLSAWTV
TRASCIGCKAVLKDEREALCEHCKKNGGEIYQNQIADLCQMEEKYHSMWVQCQRCQGSLH
QDVICTNRDCTIFYMRKKAQKELEEQGKIVQRFDYGEW
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgtaatgtttaattccgggaaccgcggtcgcggtcgtagcgttacaaatgcg
ctgggatccaaccgaggccgaggagcgagcagctccttcaacggaggccgcggaggattc
aactcgtcatcgagcgcaggccgcggaaatgctcgcggggggcgaggatccggtggaaat
gcgaacgggacgcctgctttcttaacccagtatacgaaatcgatgccgctttccaaacaa
aacagtgtggaagatgatgaggagatggattacgatgcgttccaggatgacttcgatgtc
gatatgcctgatgatgacatggtatctggcgattccttgactgctccagatcagggaacg
gattcactcgatggggcactgtcgaaggcgtggggccgtcctcaggttgccgagattgat
ccgagccgcgacactctggtgtttcagcaggtggaagtcgatcacaccattgaacacgcg
gtgcccggcctttccagttttcagggccagggtcccgtgattcgcttgtttggcagcacg
atggatggacgcagtgtactctgccatgttcatgggtttcacgcttacttttacgtacaa
attccggatgatatcgaaccggccaaaaccttgcagtacagcaaacagtttcatacggat
ctgaataggcggttgatgcaagaaagcaccgtatcccgcgcactcagctctggatcgcaa
ggagttgcttccggtgtggctgtgattcaaacggaagtcgtgaaaaagcaggatttatat
gcctatcatggtggtaccaacgaaatgagaaatttgaagcgattcctcaaagttatcgtg
gcacaaccgcgatttatagcaccggcgagacgagtgctggaagacggctcttttggtcgc
gtgtttgtaacgtacgagagtaacgtggagtttgaaattcgcttcatggtggatgctgaa
gtatacggctgtaactggattgagttacccgcaggaaaatataaaactcgaacgacctcc
agcaaatttagtccagaatttcaaagtggaaaggctacagtatcgcgctgtcagatcgaa
gtggacgtcaagtgggaaaacatgaaatctcattatccggatgatgagtggagcgatatg
gcgcctttccgtatcctcagcttcgatattgaatgcgccggcaggaaaggaattttcccg
gagccaaattgcgatcctgtcatacagattgcaagtatggtgcagcgaaatggggaaaag
gaaccctttatccgtactgttttcacactgaagaaatgtgcgcccattgttaactccaag
gtagtttgctttgaaaccgaggaagatctcctggacaattgggcaacattcgtccgtctg
gtggatccggatatcgttaccggttataacatccaaaatttcgactttccgtatttaata
gatcgtgctgcccacttaaagcgcagtagattcccatttctcgggcgtctgaaaaatacc
gtcacgcgtgtccgcgaagttcagctgcaatccaagcaaatgggtgctcgcaagaacaag
ttttgcaacatcgagggacgagtgacttttgatttgttgcaagttcttctgcgggattac
aagctccgctcgtacacccttaatgccgtgagctaccacttcctgcaagagcaaaaggag
gatgtgcagcactccatcattacggacctgcagaacgggaatgagcacacgcgccgacgc
ttggcagtgtattgtttgaaggatgcctggttgccgttaaggttgatcgacaagctgatg
agcttggtaaattatatggaaatggccagagtgaccggagtaccgctgtcctatttatta
gcacgaggacaacaagtcaaagtggtgtcgcagctgcttcgagcagcagcaaaagaagcc
tacgtgatgcctgccagacatgttcaaactggcgacgaattcaccggtgctactgtgatt
gaaccaaaaactggatactatacgaagcctatcgccacgttggattttgcttcactgtat
ccgtccatcatgatggcgcacaatctgtgttatactaccctgattgaaaaaggaaaactg
gctgaactaaatctttcgcccgatgaattcattaaaaccccgtccggggatacgtttgtg
aaggccaccgtggtcaaaggattattgccaaagattctggagaacctgctggctacacgg
aaaaaagctaaagccgatctagccaaagaaaccgatccgttgcggaagaaagtgttggat
ggaaggcagttggcgctgaaaatcagcgctaattctgtttatggatttacaggcgcacag
gtcggaaagttgccatgtttggaaatttccggtagtgtaacagcatttggacgttacatg
atcgaggaatccaaaaagcataccgaagagcacttcacaaaagccaatggttttgctcac
gatgcagaagtcatttatggtgacacagactcggtcatggtcaattttggagtggacacg
ctggaagaagccatgaagctagggcgccaagcagcggatatcatcacgcagaagtttgtt
aaacctatcaagttggatttcgagaaggtgtattttccatatctgctcattaacaaaaag
cggtatgcgggattgtacttcaccaacactgaaactcacgacaaaatggattgcaaaggt
attgaaaccgttcgccgcgataattgtccgctcgtggccaatttgatcgacatgtgcctg
caaaagcttctgattgataaggacaaagagggtgcaatctcgtatgctaaacagaccatt
tcggatctgctatgcaaccgagtggatatatctcaacttgtgattaccaaagaattaacg
aagaaagacggcgagtacaaagcgaaacaggctcacgtcgaactggctcaccggatgcat
aaacgcgatgccggctcggcacctaatctgggcgaccgtgtgccgtacgtaattattgcc
gccgccaaaggcacaccggccttcgagaagtctgaggatcccatctacgttctggagaat
aatatccccatcgatacgcaatattatctggagaatcagctgtccaaacctttagtgcgc
atcttcgggcccatcctgggcagcgaagacaaggcggagtctgtgctgctgcgcggcgac
catacccggacgaagacgatcgttacgtcgaaggtggggaaattatcggcgtggacggtg
accagggcgtcatgtatcggctgtaaggcggtgttgaaggacgaacgcgaggccttgtgt
gaacactgcaagaagaacggtggcgagatttatcagaatcagatagctgatttatgtcag
atggaggagaagtaccattccatgtgggtgcagtgtcagcgctgtcaggggagtttgcat
caggatgtcatctgcaccaatcgggattgtacgattttctacatgcggaaaaaagcgcag
aaggagttagaagagcaggggaagatagtgcaacggtttgattatggagaatggtaa
DBGET
integrated database retrieval system
