Paramacrobiotus metropolitanus: 129584120
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Entry
129584120 CDS
T09028
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03008
Ribosome biogenesis in eukaryotes
pmeo03013
Nucleocytoplasmic transport
pmeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129584120
03015 mRNA surveillance pathway
129584120
03008 Ribosome biogenesis in eukaryotes
129584120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129584120
03009 Ribosome biogenesis [BR:
pmeo03009
]
129584120
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129584120
mRNA cycle factors
Stress granule specific factors
129584120
Ribosome biogenesis [BR:
pmeo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129584120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_8
LRR_4
LRR_Zer-1
LRR_9
Motif
Other DBs
NCBI-GeneID:
129584120
NCBI-ProteinID:
XP_055332203
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MEGYYDRDAPHERHSGALRTGVRVHRKHGAAPYARVVHTDREGDAQMGEGSASSATSQRV
AAFHPRGGQQAHRSRSLSVALPAERNVFSRLGPRNLRISRESFGTRNRGRARVVFTSRPP
LTAWFKVRLVGAATVDRTWVMNAIGERLSAENITFQPIQVAVDGNSLTFYVKDQAAANRL
RMLNKAIQFSHGPKMPIAVNPSQAPVVHLDESVKAAIKTAMGKRYDAATHSLTLSLFNEA
PEFKTASLNIQLSRASHMKAVLELIEANIKELQSLDLSKNRLSQLMDFSRLADKVQLRQL
NLSDNAIRHIRDVELLRSFIHLVDLDLSRNPIRDAYRDTPAYIEDIRKKLPNLLRLDGVD
LPKKIGFDAPARIQLPVPTPFYTPFDAQANQRLESFLLRYYEYFDGRRSELLGAYSEDAQ
FSLFIPKLYDKSSGFYSHSRNLNNVTESVVQNAKLLLGRTSIVDFFGKLPATAHAPKSFT
VDVFFNENALLGLMVTGVFREDQHKRQQFRSFSRNFVIVISEEGWRIISDTLTVTAPSVE
QVNQFRQNTAPENPSNSVATPAPTVSTASALDEPMKLAMIVNFANESGMNEQYSRLALED
NYWDYAKAGAAFLQLKSENKLPPEAFVK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtattacgatcgcgatgcacctcacgaacgtcattcaggtgctctgcgaacg
ggggtgcgagtgcaccgtaaacacggcgctgctccgtacgcccgcgtggtacacacggac
agagaaggagatgcgcagatgggcgaaggatccgccagcagcgctaccagtcaaagagtg
gccgcgtttcatccccgtggtggccaacaggcgcatcggagccgcagtctctcggtcgcg
cttcccgctgaaaggaacgtcttttcccggttgggtccgagaaatctccgaatatctcgc
gaatccttcggcacgcgcaatcgcgggcgcgcccgagtggtgtttacatcgcgaccgccg
ctgacggcttggtttaaagttcggctggttggtgcggccaccgtggacagaacatgggtc
atgaatgccattggagaacgactttccgcggaaaacattacgttccagccgattcaagtt
gccgtcgatggaaattccttaacattctatgtcaaggaccaagctgctgcaaatagactg
aggatgctgaataaagcgattcagttctctcatgggccaaagatgcctattgccgtaaat
ccttctcaagctcccgttgtacatttggatgaatccgtaaaggccgcgataaagaccgct
atgggcaaacgttatgacgcagcaacccactctctgactttgagcttgtttaacgaagct
cctgaatttaaaactgccagcctgaatattcagctgtccagagccagtcatatgaaagcg
gttttggaactgattgaagccaatatcaaagagctgcagtctctggacctcagtaaaaat
cgtctatcgcagttgatggacttttctcgtttggctgacaaagtgcaattgcgccagcta
aacctcagcgataatgcgattcggcatatacgcgatgtggagttgttacgctcttttatc
caccttgtggatctggatttaagtcggaatcccattcgggatgcgtaccgtgatacgcct
gcatacattgaggatatacggaagaagctaccgaatctgctgcggttagacggtgtagat
ctgcccaaaaagataggatttgatgcaccggcgcgtatccaactcccagtacccactccg
ttctatacgccatttgatgcacaggccaaccagcgacttgaatctttcttgctacggtac
tatgagtatttcgatggcagacggtcagaattgttgggtgcttattcggaagatgcgcag
ttctccctcttcatcccgaaattatatgacaagagctcgggtttctattcccacagccga
aatctgaacaatgtcaccgaaagtgtcgttcaaaacgcgaaattgttgcttggaaggacg
tccattgttgatttctttggtaaattacctgccactgctcatgccccgaaatcgtttaca
gtggatgtgtttttcaacgagaatgccttgttgggactcatggtaacaggtgtttttcga
gaagatcaacacaagcgccagcaattccgttcattttcacgaaatttcgtcattgtgata
tcagaggaagggtggcggataatatccgataccttgaccgtcaccgcgccttccgtggag
caagtcaatcagttcaggcagaacacggcgccggagaatccttccaacagtgttgctaca
cctgcacctactgtatccactgccagcgctcttgatgaaccgatgaaattggccatgata
gttaattttgccaatgagagtggaatgaatgagcagtatagtcgattagcgctggaggac
aactactgggattatgcgaaagctggtgctgcttttttgcaactgaaaagtgaaaataaa
cttcccccggaagccttcgtaaaatag
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