Paramacrobiotus metropolitanus: 129585701
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Entry
129585701 CDS
T09028
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129585701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmeo04121
]
129585701
Enzymes [BR:
pmeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129585701
Ubiquitin system [BR:
pmeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129585701
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129585701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
zf-C3HC4_2
Beta-prop_TEP1_C
ANAPC4_WD40
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_3
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_like
Beta-prop_WDR75_1st
zf-RING_10
Beta-prop_DCAF12
zf-RING_5
NBCH_WD40
zf-C3HC4_4
Beta-prop_RIG_1st
RING_XB3-XBAT31
WD_LRWD1
DUF3574
BBS2_Mid
Sina_RING
Relaxase_C
Motif
Other DBs
NCBI-GeneID:
129585701
NCBI-ProteinID:
XP_055334468
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSKNISTDSPRKKRRLTPLPGAHAVLLDDREELIDDPTKKIEGLDNETTSVLFTSSGSLA
STSANSLDSTFLDGNLEGKERDSLRRVLGEICAETSPCDEEDLTCPVCREIFTMPYLARC
GHTFCYDCLAKVCHISKKCPLCASEMADINQAYSNRHVDSLVTRWTRWKMLIEKKTGMTI
PSVSPSRKRPRSITEFVGEGHGSPIVVVDRQATVEQIDCVIQSLNRRKNDLITSSTIFRK
LLLKDTLEKLHAMKAAELTEVQKQLSMIECDQKAVGEELTMIGDQQLQSVSLISETPNPH
TPNPQTVPDEVFPSAQLIDLGTPTQHSPVPLSPLFSKAASSSALKERKTKVDIHLPALCD
TYVETREKNGLDSYEKNLHEFTNANSIRCLAAFAFADAVGTSTIVSSVEFDKDYDLFAVA
GVSKRIKIYDYNSVVADGMHLHFPLTEMNSSAKISSVVWNDFMRNHIACADYDGGVTVWD
ALSGKKCNTFQEHQKRAWSVDFNHQDPKVLASGSDDMKVFVWSTDSQHSINSLDAKANVC
CVQFSPLNRNILAYGSADHSIHVYDLRNTRYAYAVLKSHKKAVAYVKFMAEWELVSASTD
STLRLWDLKAAGGPATLKTFTGHHNEKNFVGLDCSGNYIATGSENNSLCIYHRAMPKPAV
QYKFEPPRESLARTLMKTDGGEFLSAVAWKKDSNILVAANSQGLIEVLEMS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatatttccacggatagtcctcgtaaaaagcgccgtctgactccactacca
ggtgcacatgcggttctgttagacgatcgtgaagaactgattgacgatccaacgaagaag
atcgaagggttagataatgaaaccacatccgttctgttcacgtcttccgggtctttggcc
tccacctccgctaactctttggattcaacgtttctggatggaaatttggaaggcaaggaa
agggactctctccgacgtgtgctgggcgagatttgtgcagaaaccagcccgtgtgatgaa
gaggatctcacttgtccggtttgccgagaaattttcacgatgccatacctcgctcgctgt
ggacacaccttctgttatgattgccttgccaaggtgtgccatatcagcaagaagtgcccc
ctttgtgcttccgaaatggcagacattaaccaggcttacagtaatcgtcatgtggattct
ttggtgactcgctggacacggtggaaaatgttgattgaaaagaagactggcatgactatt
ccgtcggttagtccttcgaggaagcgaccgcgatcgattactgaatttgtgggtgaaggc
cacggatctccgattgtggtggttgatcggcaggccacagtggagcaaattgattgtgtg
atacagtccctgaaccgccgcaaaaatgatctgataacgagcagtaccatttttcgtaaa
ttgcttctcaaggatactttggagaaactgcatgcgatgaaagccgctgaattgactgaa
gttcagaagcagttatcaatgattgaatgtgatcaaaaggcggttggcgaggaactgacg
atgatcggtgaccaacagttgcagtcggtttctttaatttctgagactccaaatcctcat
actcctaatccacaaacggttcctgatgaggttttcccttctgcacaactgatcgacttg
ggaactcccacccagcattcgccagttccattgagtccgcttttctccaaggctgcttcg
agttcggcactgaaagaacgcaagacaaaagtggacattcaccttcccgctctctgtgat
acgtatgtggaaactcgggaaaagaatggcttggactcgtatgagaagaatcttcatgaa
tttacaaacgctaactcgattcgctgcctggctgcatttgcttttgcggacgctgtaggc
acatcgacgattgtctcgagtgttgagtttgacaaggactatgatctgttcgcggtggct
ggagttagtaaacggatcaagatatacgattacaactctgtagtggcggatggaatgcac
cttcactttcccctgacagaaatgaactcgtcggcaaagataagctctgtcgtgtggaat
gatttcatgcgcaaccacattgcttgtgcggactacgatggcggtgttaccgtctgggac
gcactttctgggaaaaaatgcaacacatttcaggaacatcagaagcgcgcttggtcggtc
gatttcaatcaccaagatccgaaagtgttggcgtcgggttcagacgacatgaaggtgttt
gtgtggtcaacggacagccaacattctatcaatagcctggacgctaaagccaacgtttgc
tgtgttcagttcagcccgttgaatcgcaacattttggcgtatgggtctgcagaccattcg
atccatgtatatgatttgcggaacacacgctatgcctacgctgttctcaagagccacaag
aaagccgttgcttacgtgaaatttatggccgagtgggaattggtttctgcatctaccgat
agcacgctgcgcctgtgggatttgaaggctgctggaggacctgctacgttgaaaactttt
acgggtcatcataatgaaaagaattttgttggtcttgactgttccggaaattacattgct
acaggaagcgaaaataactctctttgcatttaccatcgtgcgatgccaaaacctgctgtt
cagtataaatttgaaccaccacgtgaatctctcgctcgaacactgatgaaaacggatgga
ggggaatttttgagtgctgttgcatggaagaaggactccaatattttggtcgctgcgaac
agccaaggtttgatcgaagttttggagatgtcgtag
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integrated database retrieval system
