KEGG   Paramacrobiotus metropolitanus: 129585714
Entry
129585714         CDS       T09028                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
pmeo  Paramacrobiotus metropolitanus
Pathway
pmeo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pmeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129585714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmeo03400]
    129585714
DNA repair and recombination proteins [BR:pmeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     129585714
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT RTT107_BRCT_5 LIG3_BRCT GAGA_bind
Other DBs
NCBI-GeneID: 129585714
NCBI-ProteinID: XP_055334488
LinkDB
Position
Unknown
AA seq 624 aa
MDDPSANIDLEIVDVSSEAEDTPGKNVIASKDSAAWSTDTPGLNDAFVIVKMDRPSKIQT
IRVVNNWTALLEIQGERAANVDSGKWETIVAKSSLMTPSDSRSKENGQAERLFTLKSDQT
PVVWERIKFICQQPFNRELRFGLTSIQIIAPTLGSAGGRFQLKKKETNGSIRPGDLFAAS
TRTDEADSAVVEKKDAAEEQSQALETSQNGSTTENQETETNEPAPPAPESSQSSPRKRGR
PKKENSSPQPSTSKGGRAQGVKRKKDEEEDLPDDNEEDDDNSVRRKTRRGAKTQDLKGIM
KGCVMALSGFVNPLRSELREKMLDMGAKYRPEWEDECTHLICAVAGTPKFNQVRAAGGRI
VKKEWIEECYKNKRMMPWRTFMLKPKPTKRDDDADDEEDAKFHEDEEWEPDADESSGEEE
EDAEESDADIADELDDPLSDIDEEEFSAHEDVDDLESESSGDDRKKRKRSAKSKVKKPAA
KKPKKKSPKRRRGGVHYDDETDEEEDDEDLDLTDSEETVDDGKGFTPRQRPLFRNMHFHL
YGEFPDETEEDELKSLITDLAGTIRDHNDELVTHCVTPMKWSPEFEEVKRENPRMHFVTP
RWVYDCRDKRTLVDPRLYQLPRNE
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggacgatccatctgccaacatagacttggagatcgtggatgtcagctccgaagcggag
gatacgccaggaaagaatgtaatagcttcgaaagattctgctgcctggagtaccgatacg
cctggcctgaacgatgcgttcgtgattgttaagatggaccggccatccaaaatccagaca
atacgagtggttaacaactggactgccttattggagattcaaggcgaacgtgccgcgaac
gttgattccggaaaatgggagacgattgtggccaaatcttccctgatgacgccatcggat
tcgcgctccaaagagaacggccaagccgaacgcctgttcactttgaaatccgatcagacg
ccagttgtatgggaacgcatcaagttcatctgccagcagccatttaatcgggagctgcgc
tttggcctgacatccatccagattatcgcgccgactctgggctccgcgggtggtcgtttt
cagttgaaaaagaaggaaactaacggatcgattcgaccgggtgatctcttcgctgccagt
acacgaacagacgaagcggatagcgccgtggtggagaagaaagacgcggctgaggagcag
tcgcaggcactggaaaccagccagaacggcagcaccactgagaatcaggagacggaaacc
aatgaacctgcaccgcccgcaccggaatccagtcagtctagtccgcgaaaacgcggccgg
ccgaagaaggaaaacagtagtccacagccgtcgacatcgaaaggtggtcgtgcgcaagga
gtcaaacgaaagaaagacgaagaagaagacctgccggatgacaatgaagaggacgacgat
aatagtgttagaaggaagactagacgaggcgcgaagacacaggatttgaagggaataatg
aaaggctgcgtgatggctcttagtggttttgtcaatcctttgcgatctgaacttcgcgaa
aaaatgcttgatatgggcgctaaatatcgaccagaatgggaggatgaatgtacacatctc
atttgcgcggttgccggaacaccgaaattcaatcaagttcgtgctgcgggcggacgcata
gtgaaaaaagagtggatcgaggaatgttacaagaataagcgcatgatgccgtggagaaca
ttcatgttaaagcccaagccgactaaaagagacgatgatgctgatgacgaagaagatgcg
aagtttcatgaagatgaagagtgggaaccagatgcggatgaatcgtcaggtgaagaggaa
gaggatgctgaggaatcggatgcagatattgcagatgagcttgatgatcctttatctgat
atagatgaggaggaattttctgcccatgaagatgtcgatgacctagaatcagaatcttcc
ggggatgatcgaaaaaagaggaagcgatctgcaaaatccaaagtaaaaaagcctgcagcg
aagaaacctaaaaagaaatcccctaaacgtcgtcgtggaggcgtgcattacgacgatgaa
actgacgaagaggaggacgacgaagatctcgatctaacagactctgaagaaacggtggac
gatgggaagggatttacaccgcgacagcgaccactcttccgcaacatgcatttccatctg
tacggcgaatttccagatgagaccgaagaagatgagttgaagtctttgataaccgatctt
gccggtaccattcgtgatcataatgatgaacttgtgacacattgtgttacaccgatgaaa
tggagtcctgaatttgaagaggtaaagcgtgaaaatccgcgaatgcattttgtcacgcca
agatgggtgtatgactgccgcgacaagcgaactttagtggatccgagattgtaccaacta
cccagaaatgaataa

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