Paramacrobiotus metropolitanus: 129586185
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Entry
129586185 CDS
T09028
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129586185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmeo03041
]
129586185
Spliceosome [BR:
pmeo03041
]
Complex B
Other components
Prp19-related factors
129586185
Complex C
129586185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
RRM_YTH1
Torus
RRM_occluded
zf-CCCH_2
zf-CCCH
zf-CCCH_3
Nup35_RRM_2
zf-CCCH_12
zf-CCCH_4
zf-CCCH_PARP12
zf-CCCH_10
Calcipressin
RRM_3
Rhodanese_C
DUF4428
Motif
Other DBs
NCBI-GeneID:
129586185
NCBI-ProteinID:
XP_055335218
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MTLSLGNNPYNRMSWEDADFPILCQTCLGDNPYLRMMKEKYGSECNICQRPFTVFRWCPG
KGMRYKSTIVCQTCSKMKNVCQTCLLDLEYGLPVQVRDNVLGQKHDIPKSLVNREYYTQN
MEVAMTEAGGSVSGLDLLGMTQSQNDQLRKLRRHEPYYKRNAPHICSFYLKGECKRGEEC
PYRHEKPSDPDDPLSSQNIRDRYYGNNDPVADKLMKKLSRLPKLEPPEDPNITTLYVGNV
MEAITDKDLRDFFYQYGEIRNLKLVHKQHCAFVEYTTRQAAELAADQSFNKVTLHGIRLN
VRWAKPQSKQKEGGTGDPREKLPFVPGLPGALPLPEKLLLQPPMEIPPVHLGLGAPPMGP
PPVYYPSQDPTRLGSGKHGSQY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgactttatctctgggaaataatccgtataatcggatgtcatgggaagacgcggatttc
ccgatactttgtcaaacttgtttgggtgacaatccttatttgaggatgatgaaggaaaag
tacggaagcgagtgtaacatctgccagcggccctttacggtttttcgatggtgtcctggc
aaaggaatgcgatacaagagcactatagtctgccagacttgcagcaaaatgaaaaatgtc
tgtcaaacgtgcttgctggatttggaatacggcttgcccgtgcaggtgcgggacaatgtc
ctcggacagaaacacgacattccgaaatcccttgtcaaccgggaatattacacccagaat
atggaagtcgccatgacggaggcagggggcagtgtttctggattggatttgttgggcatg
actcagtcccagaacgaccagctgcgaaaattacgccgacatgagccgtactataagcgt
aatgctccacacatctgctcgttctacctcaagggcgaatgcaagcggggcgaagaatgt
ccttaccgtcatgagaagcctagtgatcccgatgatcctttatcatcgcaaaacattcgg
gaccgttattacggtaataatgaccctgttgccgataagttgatgaagaaactctcccga
ttacccaaactggagccccccgaagatccaaatataaccactctgtatgtcggcaatgtt
atggaggcgatcacggataaggacctccgggattttttctatcagtatggagaaatccgg
aatttgaagctcgtccacaagcagcattgcgcttttgtcgaatacaccactcgacaagcc
gccgaacttgctgctgatcagtccttcaataaggttaccttgcatggtatccgcttgaac
gtgcgttgggccaaaccgcagtcgaagcagaaagaaggcggcacgggcgatccccgggag
aaactgccattcgttccgggattgccgggcgctcttccccttcccgagaaattacttctc
cagccaccaatggaaataccccccgtgcaccttggactgggagcccctcctatgggaccc
ccgcctgtttattatccttctcaagatcctaccagactcggatcaggaaaacacggaagt
caatattga
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