Paramacrobiotus metropolitanus: 129586325
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Entry
129586325 CDS
T09028
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129586325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129586325
Enzymes [BR:
pmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129586325
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
129586325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
YhfH
A-2_8-polyST
Motif
Other DBs
NCBI-GeneID:
129586325
NCBI-ProteinID:
XP_055335459
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MADVSMEPRDRKMSLSSPNPQSPHAMSGRPQFLPPGTRPPFAPRPAPASQSTMQKLHCLT
TSGTGDAFSTNRIPPARLSAITFGPQSDAEIRSQSVVDVHLNTLAVQNGSSWDMPSHGLL
DPKMGVNLRAKKCGTCGKQMAECPGHFGHLQLYYPLFHMGYFKNVFQIMQSVCQSCSRVL
LHGPQRISYLSKANKPMTLAAKKDLRKKIVELCKKQKICQYCLATQTDIRRFGYYRMVMD
VLRPAATQRKLLPHIVHTADVPSLEPGTGDQPRADLGTAKILLNPVYVLKVLRKIPLQDH
PLLLCGKISPESFLMSCLQFPPVPIRPTVMQEEGTVNQDDITVAISGVLHWNQLLKEKID
RDPVRSNLESWENMQWNYNKVLNGSAKDPVSGSAGTAFAKPSKGFEQRLKGKQGRFRGNL
NGKRVNFSGRTVISPDPNLRLDEVGIPVYMAKILTFPIHVTEKNIETMRILVRNGSQKHP
GADKITKCQLDGSSYSINLHNEKIAREQAHALQIGDVVERHLQNGDPVLFNRQPSLHKMS
IMCHKARVLPSRTLRFNECVCTPYNADFDGDEMNVHVPQTYPARAEAETLMLSTKNILTP
RNGEVIIGAHQDFITGSYLLSNKDNFFTRAEFDQLVSQMLVGKERTLKIDWPLPAIVKPE
KLWTGKQVLSVVLCPNRERGYGKNAHELSGFLNVRTKGKNYTKNEDLCSNDSFLVIHNGE
LMAGTFDKNNVGTGSRKNLFCHLFHDCGSAYAADVIYRLTRVTAYFLTHRGFSIGIEDVS
PSAALIQTKKEHIKAAYRKCEDLIDQLKRGVLENRPGCTKEETLESGMVQELSTVRDRMG
KICFDSLPKTNAPLIMAQCGSKGSVINISQMAVCVGQQVISGKRIPNGFEDRSLPTVPRY
SKEPLAKGFVENSFFSGLTPSEFFFHTMAGREGLVDTAVKTAETGYMQRRLIKCLEDVIV
HYDRTVRNSVNEVIQLRFGEDGLDPASIEDEDYPIDLEHRWRHAISIYPFNSRLDKHLSR
WEVKMHWDRAVPTMVVKLGGQTFAESSSEVKYFLNNLEEFLKKKMAKMDADEERYGPVSH
SDVQCDDRLYRHHVIEKQLNGFFGLCIQKRIKSHVEPGTAVGALCSQSIGEPGTQMTLKT
FHFAGVASMNITLGVPRITEIINATTNIRTPIITTFLTNKVDERFARLVKAQLERTMLSD
VTLIMSDVLSEDQIAVVFELAKDIIRSLLLPVNAQKIAVILKTHPKTSKLIRDVECYGNW
IVKALINDDDFKGKKVDRKSAFLGRAHELRRLAGEIVVAGLPTASRAVIHKQTEDDGYRL
LVDGTDLRAVLGLQGVNSNKTYTNNCMEIFRVLGVEAGRASIIQEVMYTMKSHGMSIDWR
HYSLLADTMTARGNLYGFTRYGMAKMKDSALMLASFEQTVDHLYDAAYYGVTDDICGVSE
SVILGQDVRVGTGICKILPKTSSCRPGANDLKKTFNISAMS
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtcagcatggaaccccgcgatcgcaaaatgagtctctccagccccaatccg
cagagcccccacgctatgtccggacggccgcagtttcttcccccgggtacgcgaccgcct
ttcgctccccgccctgcgccggcgtcgcagtcgacgatgcagaaactgcactgtctgacg
acatcgggaaccggcgacgcgttctccaccaatcgcattcccccggcgcgactctccgcc
atcactttcggaccccagagtgatgcggagatccggtcacagagcgttgtggacgttcat
ctgaacacgctggctgtgcagaacggcagctcttgggatatgcccagtcacggattactg
gatcccaaaatgggcgtcaatctgcgcgccaaaaagtgcggcacgtgtgggaaacagatg
gcggaatgtccgggacattttggccatttgcagctgtattatccgcttttccatatggga
tacttcaaaaatgttttccagatcatgcagtctgtttgtcagagctgcagtcgcgtattg
ttgcatgggccgcaacggatctcttacctttcgaaagccaacaaaccgatgactttagcc
gccaaaaaagacttacgaaaaaaaatcgtggaattgtgcaaaaagcagaaaatatgtcag
tattgtttggcaacgcagacggacattcggcgtttcggctattaccgcatggtgatggat
gtactgcgaccggccgccacccagcggaaattacttccccacattgtacacacggctgat
gtgccatcactggaacccggtacgggcgatcaaccccgtgctgatctgggcacagccaag
attttattaaatccggtctacgtgctgaaagttctgcgaaaaatccccctgcaagaccat
ccgttattactgtgcggaaaaatcagtccggaaagctttttaatgagttgtctacagttt
ccacctgttccgattcggcccacggtgatgcaggaagagggcaccgttaaccaggatgac
atcactgtagcaatttccggtgtactgcactggaaccagcttcttaaagagaaaattgat
cgcgatccggtgcggagtaatctggaaagctgggagaatatgcagtggaactataataag
gtgttgaatggttcagcaaaggatcccgtttccggctcggcgggcacagcattcgccaag
ccctcgaagggctttgagcaacgtctcaagggaaaacagggtcggttccgtggaaatctc
aacggaaaacgagtgaatttctcggggcgcaccgtaattagtcctgatcctaatttgcga
ctggatgaagtgggcataccggtgtatatggccaaaattctgacctttcccatccacgtc
acggaaaagaatattgagaccatgcggatactggtgcggaatggctcgcagaagcatccg
ggcgctgacaaaattaccaaatgccaattggacggcagttcctattccattaacctgcac
aatgagaaaattgctagagaacaggctcatgctttgcaaattggcgatgtggtcgaacga
cacctacaaaatggagaccctgtattgttcaatcgccagccttcgctgcataaaatgagt
attatgtgccataaggcccgcgtgctgccgtcgcgtaccctgcgcttcaacgagtgtgtc
tgcacgccgtataacgccgactttgacggcgatgaaatgaacgtccatgtcccgcagaca
tatccggcccgagcggaagcggagacactgatgttgtcaaccaaaaatatcttgacaccc
cgcaatggggaagtcattatcggtgcccaccaggacttcattactggctcgtatctgcta
tccaacaaagataatttcttcacgcgggcagaattcgatcagttggtctcgcagatgcta
gtgggaaaagagcggactttaaaaatcgactggccactaccggctatcgtcaagccggaa
aaactttggaccggaaagcaagtgctcagtgtggtgctgtgccctaatcgcgaacgcggt
tatgggaaaaacgcgcacgaactttccggatttttgaatgtccggacgaaaggaaagaat
tacacgaaaaatgaagatctttgtagcaatgattcatttttggttattcataacggcgag
ttaatggccgggacgttcgataagaataatgtgggcacgggctcgagaaagaatttgttt
tgtcatttgttccatgactgcggaagcgcttatgccgccgatgtcatatatcgtctcacg
cgggttacggcgtattttttaacccacagagggttctccattggaatcgaagacgtgtca
cctagtgccgcgttgattcaaaccaagaaggagcatattaaagcggcttacaggaaatgc
gaagatcttattgaccagcttaaacgtggagtgttggagaacagacctggttgcactaaa
gaggaaaccctggaatctgggatggtccaagaattatctactgtgcgcgatcggatgggg
aaaatttgctttgactctttaccaaaaacgaacgctccactaattatggcccaatgtggt
tctaaaggatctgttatcaatatctcgcaaatggctgtctgtgtcggtcaacaagtgatt
agcggtaagcgtattcccaatggattcgaagatcgctccctgccgaccgtgccgcgctac
tccaaagagcccttggccaaaggattcgtggagaatagctttttcagcggactgacaccc
tcagagttttttttccataccatggccggtcgcgagggtctggtggacactgcagtgaaa
acggcggagaccggatacatgcagcgacgactaattaaatgcctggaagatgtcatcgtt
cactatgatcgaaccgtgagaaattccgtcaacgaagtaatacagttgcggttcggcgag
gacggtctggatcctgcatcgatagaggacgaagattacccgattgatctcgaacaccgg
tggcgccatgcgatcagcatttaccctttcaattcacgcttggataaacacttgtcacgc
tgggaagttaagatgcattgggatcgcgctgtacccactatggttgtaaagcttggcggc
caaacctttgcggaatccagcagcgaagttaagtacttcttaaataaccttgaagaattt
ttaaagaaaaagatggccaagatggatgccgacgaagaacgctatggcccagtcagccac
tccgatgtccagtgcgacgaccgactgtaccgtcaccatgtaatcgagaagcagttgaat
gggttttttggactgtgtattcaaaagcgcatcaaatcccacgtggagcccggtacagca
gtgggtgcgttgtgttcacagagtattggtgagccgggaacacagatgaccctgaagaca
ttccactttgcgggagttgcctctatgaatatcactttgggagtaccgcgcatcacggag
attattaacgccacgacgaacattcgcacgccgatcataactacgtttctgacaaataaa
gtcgacgaaaggtttgcgcgtctggttaaagcgcagctggaacgcactatgttgtcggat
gtgactctgattatgagcgacgtgttgtcggaggatcagatcgcagtagtgtttgaattg
gccaaagatatcattagatctttgttgctgccggttaatgcgcagaaaatcgcggtgatc
ttgaagactcatcccaagacttcgaaacttattcgggatgtggagtgctatgggaactgg
attgtgaaggcgctgatcaatgatgacgattttaagggaaaaaaggtggatcgaaagtcg
gcgtttttgggcagggctcatgaactgcgtcgcctggccggggaaattgttgtagcgggt
ttgccaacagcatcgcgagcagtaatccacaaacaaacagaggacgatggctaccgtttg
ctggtcgatggtaccgatctgcgcgctgttcttggcttgcaaggtgtcaacagcaacaag
acatacactaacaactgtatggagatatttcgcgttcttggcgttgaagccggacgagct
tcgattattcaggaagtgatgtacacgatgaaaagtcacggaatgagcatcgactggcgt
cactattccttgctggctgacacaatgaccgccaggggtaatctttatggtttcacgcgg
tacggcatggcgaaaatgaaggattcggcgctgatgttggcgtcttttgaacagaccgtg
gaccacttgtacgatgcagcgtattacggtgtaacggacgatatctgcggtgtcagcgag
tccgtcattctgggacaagatgttcgagtgggaaccggaatatgtaaaatactgcccaag
accagcagctgtcgaccgggggccaatgatttaaagaagacctttaacataagtgccatg
tcctga
DBGET
integrated database retrieval system
