Paramacrobiotus metropolitanus: 129588088
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Entry
129588088 CDS
T09028
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129588088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129588088
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129588088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
COX4
Motif
Other DBs
NCBI-GeneID:
129588088
NCBI-ProteinID:
XP_055338112
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MDLDESEVLDLDAGTNTTTAEWDATADPSILDADTDTSELGNKCFVIPHHVRKALDLTDG
KGSLLKLLQRCGTPQGARLMERWLIHPLTCVAEIEDRLELVELFVNSPSFRTTIADTYVK
KFPDFAPLVKKLEKKRISLQDLYKIFVAVERLPALVRALKEGLRDASERGTQLVQEKFTS
KLQSFYEMLSNYRMLVKQTVDVAYIQKTGEYRIRPDVTPELEEMSEQQEDLLERMKKDWT
KLSKEVQLEKEKALKFEYDRRDGYLYRVTSKEEKKLRPHVTRLGLIRKKDKTSGFCFQTP
DLKSLDAEYKVLRDRYEESQQHVMEELVNTAATFHEPCRTLNQIMAPLDVICALARVACE
ATIPYVRPKIFPKETGTIELIDSRHPCIESFLHKDFIANSVRFKENEERFHGRXYYGTSX
GASGLXVALSIILAQMGSFVPCSSAAVSLVDGVYTRIGSGDSVTKGVSTFMMEMLETQDI
LKKATEHSLIIIDELGRGTSTYDGYGLAYAVAEHIATRLKSYCMFTTHFNELAELQKEVK
SVVLSQVTAVVSEDGIVFRYQVQPGVSRESFGVNIARLTGMPSHVIQDAAAILDELEKTH
AIGSSVSS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggatttagacgagagtgaagttttggatttggatgccggaacgaacactacaacagca
gaatgggatgcaacggcagaccctagtatcctggacgccgatacggatacatccgaactc
gggaacaagtgctttgttattccacatcatgtccgcaaagccttggatctgacggatggg
aaaggaagcttgctgaaactgctgcagcgctgtggaactccacaaggagctcgcttaatg
gagcgatggctgattcatcccctgacgtgtgttgcggaaatcgaggatcggctggaactt
gtggaattattcgtcaacagtccttctttccgtaccacaattgccgacacttatgtcaag
aaatttcccgattttgcgcccttggtcaagaaattagagaagaagaggatcagcctgcag
gatttgtacaaaatattcgtcgccgtcgaaaggctcccggctcttgtccgtgcgttgaaa
gaaggcctgagagacgcctctgagcgtggtacacaactagtccaggagaagttcacgtcg
aaactgcagtcgttctacgaaatgctgagcaattatcggatgttggttaagcagaccgtt
gatgtcgcttatatccagaaaaccggggaatacaggattcgacctgatgttacgcctgag
ctggaagaaatgagtgagcaacaagaggatttgctggagcggatgaaaaaggactggact
aaactttcgaaggaagtgcagctggaaaaagaaaaagcattaaaatttgagtatgatcgc
cgagatggatacttgtatcgggttacttctaaggaagagaaaaaattgcggccacatgtg
acacgacttggactaatccgtaaaaaggataaaacttcgggattttgttttcaaacgcct
gatttgaagagcctggatgctgaatataaggtcttgcgcgacagatacgaagaatcccag
cagcatgtgatggaagagctggtcaatacagccgctactttccatgagccttgtcgaacg
ctcaatcaaataatggcacctctggacgtgatctgcgctctcgctcgggttgcatgtgaa
gcaaccattccgtatgtgcgcccaaaaatctttccgaaagaaacaggaactattgagctg
attgacagtcggcatccatgcatcgaaagctttcttcacaaggatttcattgcaaattct
gtgcgattcaaagaaaacgaggaaaggttccatggtaggtgatattacggtacttcatag
ggtgcatctggtttgtaggttgctttaagtattattcttgcacaaatgggaagcttcgtg
ccatgcagttctgctgcggtatccttggttgacggagtatatactcgaattggttcgggc
gacagtgtcactaaaggagtctcgacctttatgatggaaatgctagaaactcaagacatt
ttgaagaaggccacggaacattcgcttatcattattgatgaacttgggaggggaacatct
acttacgacggatacggacttgcttatgctgtagcggagcatatcgcgactcgtttgaag
tcatactgcatgttcacaactcacttcaacgaactggcggaactccagaaggaagtgaag
agtgttgtactgagtcaagtgaccgccgtggtatcagaggatggcatcgtcttccggtat
caggttcagccaggtgtttcccgagaaagttttggtgtaaatatcgcaagacttaccggc
atgccttcccacgtcatacaggatgctgccgcgattcttgacgagctcgaaaaaacgcat
gccatcggttcctctgtatcttcttaa
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